Gene Amir_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3019 
Symbol 
ID8327209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3488359 
End bp3488982 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content74% 
IMG OID644943544 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100784 
Protein GI256377124 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.190372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC CTACCGGACC GGTGCGCATC GACGTGGAGC CGGTGACCGG AGAACCACGA 
CTGCGCGCCG ACGCCGCGCG CAACCGGGCG CGCCTGCTGG AGGCCGCCGC GCTGCTGGTG 
GACGAGCACG GCGCGGCCAA CCTGACGATG GACGCGGTGG CCAGCGCCGC CTGCGTCGGC 
AAGGGCACGG TGTTCCGGCG CTTCGGCGAC CGCACCGGCC TGCTGCTGGC CCTGCTGGAC 
CGCAGCGAGG AGCGGCTCCA GGCGGCCTAC CTGACCGGAC CGCCGCCGCT GGGGCCCGGC 
GCGGGCGCGG CCGAGCGGCT GCACGCGTTC GGGCCCGCCG TGCTGCGGCA CGAGCACGGC 
TACCGGGACC TGTACTTGGC GGCCGAGACC GATCCCGACC GGCGCTACGC GGTGCCCGGC 
CAGCGGCTGC GGCAGACCCA CCTGGTGGTG CTGCTGCGGG AGGCGGGCGC GGGCGGTGAC 
CTGACGCTGC ACGCGGTCAC GCTGATGGGG TACCTGGAGA TCGGACTGGT GAACCACCTG 
CGGACCACTC GCGGCATGAG CCAGAAGCGC CTCGAAGCGG GGTGGCACGA TCTCGTGGGC 
CGCTTGCTTG GCACGATCAG GTGA
 
Protein sequence
MSTPTGPVRI DVEPVTGEPR LRADAARNRA RLLEAAALLV DEHGAANLTM DAVASAACVG 
KGTVFRRFGD RTGLLLALLD RSEERLQAAY LTGPPPLGPG AGAAERLHAF GPAVLRHEHG 
YRDLYLAAET DPDRRYAVPG QRLRQTHLVV LLREAGAGGD LTLHAVTLMG YLEIGLVNHL 
RTTRGMSQKR LEAGWHDLVG RLLGTIR