Gene Amir_2776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2776 
Symbol 
ID8326965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3201351 
End bp3201971 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content73% 
IMG OID644943314 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100555 
Protein GI256376895 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.205598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCGT TTGGGGATGG GCAGTACGGT TCCCCCATGA GCGAGGCGCG CAGCGAACCC 
GTCGTGAAGA CCGAGTCCGG TTCACGGGCC AGGACCCGGC GGGCGATCCT GGACGCGGCC 
GTGCGGGAGC TGAGCGCGAA CGCGGCCGTG CCGCTGGGCG AGATCGCCAC CGCCGCCGGG 
GTCGGGCGGA CCACCCTGCA CCGGTACTTC CCCGAGCGGG CCGACCTGCT GGTGGCGGTG 
ACCGCCTTCA TGGACGAGCG GATCGCCTCG GCCACCACGC GGGCCAGGTT GGACGACGGG 
TCGGCGCGGG CCGCGCTCGG GCGGCTCTGC CAGGAGTACT TCGAGCTGGG CGACGTGCTG 
ACGCTGATGT TCACCAGCCC GGTCGCGCCG AACGGCCGGG AGTGGGACTA CGAGACGCAG 
TCCGACCACT CGGTGCGGGA CGCGATCGAC CGGGGGCACG CCGAGGGCGA CGTGGACGCG 
GCGCTGGGGC GGGACTGGGT GCTGAACGTG GTGTGGAGCC TGCTGTTCTC CACCTGGGAC 
ATGGTGCGGG CGCAGGGCGC GCCGAAGCAC GCGGCGCTGA CGCAGTGCCT GCGGACGCTG 
GACAAGGCAC TGGCGCCCTG A
 
Protein sequence
MIPFGDGQYG SPMSEARSEP VVKTESGSRA RTRRAILDAA VRELSANAAV PLGEIATAAG 
VGRTTLHRYF PERADLLVAV TAFMDERIAS ATTRARLDDG SARAALGRLC QEYFELGDVL 
TLMFTSPVAP NGREWDYETQ SDHSVRDAID RGHAEGDVDA ALGRDWVLNV VWSLLFSTWD 
MVRAQGAPKH AALTQCLRTL DKALAP