Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2622 |
Symbol | |
ID | 8326811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2952595 |
End bp | 2954967 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644943162 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003100403 |
Protein GI | 256376743 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0196] FAD synthase |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCACGT CGACTCCTCG GGGCGGGGAC TGGCTGGCCC TGGCCAGTCT CTGCCTCGGC TTCTTCCTGC TCCTGGTGGA CAGCACGATC ATCTCCGTCG CGCTGCCCGC GCTGATGGCG GACCTGGGCG CCGACGAGGG CACGGCGATC TGGGTCAACA GCTCCTACCT GTTCGCGTAC GCGGTGCCGC TGCTGGTGGC GGGCAGGCTG GGCGACCGGT ACGGGGCCCG CGCGGTGTAC CTGGCGGGCC TGGTGCTGTT CATCCTGGCG TCGCTGGCGT GCGGCCTGGT GTCCGATCCG CTGGCGCTGG TGGCGTGGCG GGTCGTGCAG GGCCTCGGCG CGGCGCTGAT GACGCCGCAG AGCATGACGA TCATCCGCAG GCTGTTCGCG TTCCCCGCGC TGGGCGTGGC GATGGGCGTG TGGGCCTCGG TCGGCGGGGT GGCCTCGGTG AGCGGCCCGC TGCTGGGCGG GGTGCTCGTG GGCACGTGGG GCTGGGAGTC GATCTTCCTG GTCAACGTGC CGATCGGACT TCTCGCGCTG GCCGCCGCCT GGGTGTGGCT GCCGCGCGCG GAGCCGCTGC GCACGACGAT CCCGGTGACC GGCGTGCTGG TCAGCGGGCT CGGGGTGTTC GGCGTGGTGG CCGGCATCCA CGGCGGGGTG CTTCCGCCGT GGGTGCCCGG CTGGGCCGCG GTGCTGGTCG GCCTGGTGCT GGTGGGCTGC GTGGTGTTCG CGCAGCGCGG CGAGCCGGAC CGGGCGCTGG TGCCGGTGCC GCTGTTCCGC GACCGGGGGT TCGTGATGGC GTCGGTGGGC GCGGCGATGT CCTCGTTCAC GGTCGGCGCG GCGATGATCC CGGTGATGCT GCACCTGCAG GGCGCGCGCG GGCTGGACTC GATGTCGGCG GCGCTGGTGC TGATCCCGAT GGGCGTGGTG TGCGCGGCGA CGGCCCCGTT CGCGGGCCGG TCGGTGTCGG CGCGCGGGCC CCGGTTCACG GCGCTGATCG GCTCGATCTC GCTGGCGGTG TCGGTGCTGC TGGCGGCGGT GCTGGTGGCG GCGTCGGCGC CGATCTGGGT GTTCGCGGCG GCGCTGACGG TGTTCGGCCT GGCCAACGCG TTCGTGTGGG CCCCGATGTC GGTGGCGGCG CTGAACTCGG CTCCGGACCG GTTGATGGGC GCGGCCTCGG GCGCGTTCAA CGCGATCAAG CAGGTCGGTG CGGTGGTGGG CAGCGCGGTG ACCGCCGCGC TGCTGGCGGT GACGTCCCAG GGCGCGGCGC TGGCCGCGCT GGGCGTGGCC GCGCTGGTGT GCGTGCTGGC TTCTGCTCTG CTCGGGAGGA ATGCGGTGGA ACCGCTGGGA CGGGTGTCCG GGGTCGTGGT GCACGGCGCC GGGCGCGGCA AGGACTTGGG CTTCCCCACG GCGAACCTGG ACTTCGACGC GTCGACCCGG GTGCCCGAGG ACGGCGTGTA CGCCGGGCGG TTCACCCTGC TGGACGGGCC GGACGCGCCG GTGGTGCTGC CCGCGCTGGT GTCGATCGGG TCGAACGAGA CGTTCGACGG GTCGGCCCGC ACGGTCGAGG CGCACGTGCT GGACTTCGAC GGCGACCTGT ACGACCGGCG CGCCGAGGTC GAGCTGGAGT CGTGGATCCG GGGTCAGGTC GGGTTCTCCT CGGTGGAGGC GCTGGTGGAG CAGATGCGGC GGGACGAGGT CGTGGGGCGG GCGCACTTCT CCTCGTCCGG GCCCGCCGGG TCGGTGGCCT CCTCGGCCCC GGCGAGCGCG GCGGACCGCT GGAACGACCG GGTGGGCGGC GAGGAGCCGC GCTCGGGCGT GCTGGTGGCC GAGCGCGCGG GCGGTCCGGT GACCGAGCCG TACACCGACG ACGTGGTGGC GCTGCGGCAG GCGTTCTCGG CGTTCCCGTC CGGGGTGGCG GCGATCGCCG CGCTGGTGGA CGGTGAGCCG GTGTCGCTGG TGGTGTCCTC GTTCAGCGTG GGCACCTCGC AGGAGCCGCC GCTGGTGCTG TTCGCGGTGC AGCTGTCGTC CACGACGTGG CCGGTGCTGT CGACCGCGCC GCTGCTGGGC GTGTCGGTGC TGGGCGAGGG GCACGCCGGG AAGGTGCGGC AGTTGGCGTC GACGAAGGAC CGGGAGAACC GGTTCGGCGG GTTGGAGACG GCGGTGTCGG ACTCGGGCGC GGTGTTCCTG GAGGGCGCGC CGCTGTGGCT GGAGTGCGCG GTGGAGCACA CCTACCCGGC CGGGGACCAC GAGATCGTGG TGCTGCGGGT GCGGGGGCTG CGCTCGGACC TGGCGCAGCG GCCACTGGTG TGGCACCGGT CGGCGTTCAC CACGCTCGCG GACGAGCGGG AGCGGGAGCG CGTGGCCGGG TGA
|
Protein sequence | MSTSTPRGGD WLALASLCLG FFLLLVDSTI ISVALPALMA DLGADEGTAI WVNSSYLFAY AVPLLVAGRL GDRYGARAVY LAGLVLFILA SLACGLVSDP LALVAWRVVQ GLGAALMTPQ SMTIIRRLFA FPALGVAMGV WASVGGVASV SGPLLGGVLV GTWGWESIFL VNVPIGLLAL AAAWVWLPRA EPLRTTIPVT GVLVSGLGVF GVVAGIHGGV LPPWVPGWAA VLVGLVLVGC VVFAQRGEPD RALVPVPLFR DRGFVMASVG AAMSSFTVGA AMIPVMLHLQ GARGLDSMSA ALVLIPMGVV CAATAPFAGR SVSARGPRFT ALIGSISLAV SVLLAAVLVA ASAPIWVFAA ALTVFGLANA FVWAPMSVAA LNSAPDRLMG AASGAFNAIK QVGAVVGSAV TAALLAVTSQ GAALAALGVA ALVCVLASAL LGRNAVEPLG RVSGVVVHGA GRGKDLGFPT ANLDFDASTR VPEDGVYAGR FTLLDGPDAP VVLPALVSIG SNETFDGSAR TVEAHVLDFD GDLYDRRAEV ELESWIRGQV GFSSVEALVE QMRRDEVVGR AHFSSSGPAG SVASSAPASA ADRWNDRVGG EEPRSGVLVA ERAGGPVTEP YTDDVVALRQ AFSAFPSGVA AIAALVDGEP VSLVVSSFSV GTSQEPPLVL FAVQLSSTTW PVLSTAPLLG VSVLGEGHAG KVRQLASTKD RENRFGGLET AVSDSGAVFL EGAPLWLECA VEHTYPAGDH EIVVLRVRGL RSDLAQRPLV WHRSAFTTLA DERERERVAG
|
| |