Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1887 |
Symbol | |
ID | 8326072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2089204 |
End bp | 2090295 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942436 |
Product | ATPase associated with various cellular activities AAA_5 |
Protein accession | YP_003099681 |
Protein GI | 256376021 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCCGACA CCGACTTCCC CGACGACCTG CAGCGCCCGC CAGCCGAGGT GCGGTTCGCC GACGAGCTGG CCAGGCTGCG CGAGTCCGAC CGAGCGCACC GGCCGCCGGG CTGGGCGCTG AGCCTGGACG CCGCCCGCCG GTTCGTGGTG GGCGACGACA AGCTCGGGGT GAGCCGCAAG TTCGTCGGCG ACCCGTCGCT GGTCGACCGC TCGCTCGTCA CCCTGGCCAC CAGCCGGGGC CTGATGCTGG TCGGCGAGCC GGGCACCGCC AAGTCGCTGC TGTCCGAGCT GATCGCGGCG GCCGTGTGCG GCGAGTCGAC GCTGACCATC CAGGGCGGCG CGGCCACCAC CGAGGACCAG ATCAAGTACT CGTGGAACTA CGCGCTGCTG GTCGCCGAGG GCCCGTCGCC GCGCTCGCTG GTGCCCGCGC CGATGCTGCG CGGCATGGCC GAGGGCAAGG TGGTGCGGTT CGAGGAGATC ACCCGCTGCC CCCTCGAGGT GCAGGACTGC ATGTTGTCGC TGCTGTCCGA GCGGGTCGTG GCGGTGCCGG AGCTGATCGG GCGCGACAGC ATGGTGTTCG CGAAGGCCGG GTTCAACGTC ATCGCCACCG CGAACACCCG CGACCGGGGC GTGAACGAGA TGAGCGCGGC GCTGAAGCGG CGGTTCAACT TCGAGACCGT GTTCCCGATC GCGGACCTGC GCACCGAGCT GGAGCTGGTC GAGCAGGAGT CGGCGAAGCT GCTGGAGCGG TCCGGGGTGG GCGTTCCGCC GCGCCGGGAC GTGCTGGAGG TGCTGGTGCG CACGTTCCGC GACCTGCGCG AGGGCGGCAG CGGGCAGGCG GACCGGCTCA GCACGGTGAT GAGCACGGCC GAGGCCGTGT CCGTGGCGCA CGCGGTGGGC CTGCGCGGCT GGTACCTGCG CGGTGAGGCG GGCACGGCGG CGGACGTGGT CGAGTGCCTG GCGGGCACGG CGGCCAAGGA CAGCCCGGAC GACCTGGCCA AGCTGCGGCG CTACCTGGAG CAGCAGGCCG GTCGCCGCAA GGGCGAGCAG TGGTCCGAGC TGCACCGGGC CCGACACCTG CTGCCCGGCT GA
|
Protein sequence | MSDTDFPDDL QRPPAEVRFA DELARLRESD RAHRPPGWAL SLDAARRFVV GDDKLGVSRK FVGDPSLVDR SLVTLATSRG LMLVGEPGTA KSLLSELIAA AVCGESTLTI QGGAATTEDQ IKYSWNYALL VAEGPSPRSL VPAPMLRGMA EGKVVRFEEI TRCPLEVQDC MLSLLSERVV AVPELIGRDS MVFAKAGFNV IATANTRDRG VNEMSAALKR RFNFETVFPI ADLRTELELV EQESAKLLER SGVGVPPRRD VLEVLVRTFR DLREGGSGQA DRLSTVMSTA EAVSVAHAVG LRGWYLRGEA GTAADVVECL AGTAAKDSPD DLAKLRRYLE QQAGRRKGEQ WSELHRARHL LPG
|
| |