Gene Amir_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1709 
Symbol 
ID8325894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1866345 
End bp1866932 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content77% 
IMG OID644942259 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003099504 
Protein GI256375844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACCG AGACCAGGCG CCGCCAGGTC GACCGCAGCG CGGACACCCG GCGCAGGTTG 
TTGGCGGCCA CGGTCGAGTG CCTCGTCGAG CACGGCTGGG CGGGGACGAC GACGACCGTG 
GTCGCGGAGC GGGCGGGCGT GTCCAGGGGC GGGCAGCTGC ACCACTTCCG CACGCGCGGC 
GAGCTCGTCG CCGCCGCCGT GGAGCACCTG GGCGCGGAGA GCGTGGCGCA CCTGAGGCGG 
CTGGCCGAGC GGGTCGAGGG CGGGCCGGTG GCGGTGGTGG AGCTGATCGC CGAGTTCTAC 
GCCAGCGACC GGTTCGCGGC GGCGCTGGAG CTGTGGGTGG CGGCCCGCAC CGATCCGGCC 
CTGCGGATCG CGGTGGTGCC CCTGGAGGCG GCGCTCGGGC GCGAGACGCA CCGGCTGGCG 
GTGGAGCTGC TGGGGGCGGA CGAGGCGAAG CCGGGGGTGC GGGAGGCGGT GCAGATCACC 
CTGGACCTGG CGCGCGGGCT CGCGCTGGCG AACCAGCTGA CCGACGACGG CAAGCGGCGC 
AGGCGCATCG CACGGCACTG GGCGGGGATG CTGGAGGCGG TGCTGTGA
 
Protein sequence
MATETRRRQV DRSADTRRRL LAATVECLVE HGWAGTTTTV VAERAGVSRG GQLHHFRTRG 
ELVAAAVEHL GAESVAHLRR LAERVEGGPV AVVELIAEFY ASDRFAAALE LWVAARTDPA 
LRIAVVPLEA ALGRETHRLA VELLGADEAK PGVREAVQIT LDLARGLALA NQLTDDGKRR 
RRIARHWAGM LEAVL