| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1696 |
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| Symbol | |
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| ID | 8325881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1853079 |
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| End bp | 1854269 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644942246 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_003099491 |
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| Protein GI | 256375831 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.467956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGAGCA CTCCGCGCAA GGCGAGCGTG TTCCAGCGCC TCTACGTCGG CAACGGCGCG
TTCGACATCG TCGGCAAGCG CACGCGGTGG TACGGGATCT TCGGCGCCAT CCTGGTGGCC
TCGGTCCTGC TGGTGATCTT CAAGGGCTTC AACCTGGGCA TCGACTTCAC CGGCGGCACG
CGCATCCAGA TGCCCGCGCA GACCGGCGAG GGCACGTCCA TCTCGCAGGA AGCCGTCCAG
GACAGCTTCA AGAAGTCCGT CGGCGAGGAC GCCACCTCGG TGCAGACCGT GGGCACCGGC
GACGCCGCGA CGTTCCAGAT CCGCTCCGAG ACGCTGACCA CCCAGCAGAT CGACGGCCTG
AAGAACACGC TGAACGACGA CCTGAAGCCC GAGGGCGGCC TGTCCTCGGT CAGCGACAGC
GCCGTCTCCG CCTCCTGGGG CGGTGAGATC ACCACCAAGG CGCTCCTCGC GCTGCTGATC
TTCTTCGTCG CGGTGATGCT CTTCCTGGCG CTGTACTTCG AGCTGGCCAT GGCGGTCGGC
GCGCTCGTCG CCGTGGTGCA CGACGTGGTC ATCACCGCGG GCGTGTACTC GCTCGTCGGC
TTCGAGGTCT CGCCCGCGAC CATCATCGGT CTGCTGACGA TCCTCGGCTT CTCGCTGTAC
GACACGGTGG TCGTCTTCGA CAAGGTCAGG GAGAACACCC GAGGCATCCT CGGCCTGACC
CGCCGCACCT ACGGCGAGGC CACCAACCTG GCGGTCAACC AGACCCTGAT GCGCTCGATC
AACACCTCGC TGATCGCGCT GCTGCCGGTC ATGGGCCTGC TGGTCGTCGG CGTCTGGCTG
CTCGGCGTCG GCACCCTGAA GGACCTCGCG CTCGTGCAGC TGGCCGGTAT GGCCATCGGC
GCGCTGTCGT CCATCTTCAT CGCGCCCGCG ATCGCGGTCG ACCTGAAGAT GCGCGACCCG
CGCTACAAGG CCCAGGCCGC TCGGGTGAAG GCCCGCCGGG ACAACGTGGC CCGCAAGAAC
GCGGTGGGCG CGGTCTCCGA GGACGAGGTC GAGTCGACCG ACGAGGACAG CCTGGAGGCC
GAGCTCCGCA AGGAGAAGGC CTTCACCGCC GCCGCGGGCG TGCCCGCGCG GCACGCCAAG
GCCGCCGACG CGCGGCGCAC CAACCGACCG ACGGGCAAGA AGCAGCGTTG A
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| Protein sequence | MSSTPRKASV FQRLYVGNGA FDIVGKRTRW YGIFGAILVA SVLLVIFKGF NLGIDFTGGT
RIQMPAQTGE GTSISQEAVQ DSFKKSVGED ATSVQTVGTG DAATFQIRSE TLTTQQIDGL
KNTLNDDLKP EGGLSSVSDS AVSASWGGEI TTKALLALLI FFVAVMLFLA LYFELAMAVG
ALVAVVHDVV ITAGVYSLVG FEVSPATIIG LLTILGFSLY DTVVVFDKVR ENTRGILGLT
RRTYGEATNL AVNQTLMRSI NTSLIALLPV MGLLVVGVWL LGVGTLKDLA LVQLAGMAIG
ALSSIFIAPA IAVDLKMRDP RYKAQAARVK ARRDNVARKN AVGAVSEDEV ESTDEDSLEA
ELRKEKAFTA AAGVPARHAK AADARRTNRP TGKKQR
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