Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1583 |
Symbol | |
ID | 8325767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1743996 |
End bp | 1745624 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942132 |
Product | ABC transporter related |
Protein accession | YP_003099378 |
Protein GI | 256375718 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCCCG TGGGTTTCCT CGATGCGAAC GGTCTCGCCT ACCGGCTCCC GGACGGGCGG GAGCTGTTCC GCGACGTCTC GTTCAAGGTC GCCGCGAATT CCGTGGTGGC GGTGGTCGGC GCCAACGGCG TCGGCAAGTC GACGCTCCTC AAGATCATCT CTGGGGACCT CGCCCCGGCC GCGGGCTCGG TGCGGGTGCA GGGCGGGCTG GGGGTGATGC CCCAGTTCGT CGGGTCCGTG CGCGACGAGA GCAGCGTGCG CGACCTGCTG CTCTCCGCCT CGCCCGCCCC GCTGCGCGCC GCCGCAGCCG AGTTGGACGT CGTCGAGCTC GCCCTCATGG AGACCGACGA CGAGCCCACC CAGATGCGCT ACGCCTCCGC GCTCGTCGCC TACGGCGAGG CGGGCGGCTA CGAGGCCGAG GTGCTCTGGG ACGTGGTCAC CGTCGCCGCG CTCGGCGTGC CGTTCGAGCG GGCCCGGTTC CGCGAGGTCA GGACGCTCTC CGGCGGCGAG CAGAAGCGGC TCGTGCTGGA GGCGCTGCTG CGCGGGCCCG AGCAGGTGCT GCTGCTCGAC GAGCCGGACA ACTACCTGGA CGTGCCCGGC AAGCGCTGGC TGGAGCAGCG GCTCGTGGAG ACCGGCAAGT CGGTGCTGCT GGTCAGCCAC GACCGGGAGC TGCTCGCCGA GGCCTCCACG CACGTGGTCA CCGTCGAGGC GCACGGCGCG TGGGTGCACA CCGGCTCGTT CACCACCTGG CACGAGGCGC GCGCCGCCCG GATCGAGCGG CTCGCCGAGG AGTGGAAGCG CTGGGAGGAC GAGCACGACC GGCTCAAGGA GCTGGTGCGC ACCCTCCAGG TGCAGGCCAC GATCAGCGAG GTGATGGCCG CCAAGTACCG GGCCATGCAG ACCAGGCTGC GCAGGTTCGA GGAGGCCGGG ACGCCGCCGG AGATGCCGGT GCAGGAGCGG GTCGCGCCCA GGCTGCGCGG CGGTCGCACC GCCGTGCGCG CGGTGACCTG CGAGTCGCTG GAGCTGACCG GCCTGATGAA GGCGTTCGAC ACCGAGGTGT TCTTCGGCGA CCGGGTCGCG GTGCTCGGCT CCAACGGGTC CGGCAAGAGC CACTTCCTGC GGCTGCTGGC GGGCGGCGAC GTCGCCCACA CCGGCTCGCT GCGGCTCGGC TCGCGGGTCG TGCCGGGGCT GTTCGCGCAG ACCCACCAGC ACCCCGAGTG GCTCGGGCGC ACGCTCGTGG ACGTGCTGTG GCACGGCGAG GGCGACCGCA AGGGCCTCGA CCGGGGCGCG GCGATGTCGG TGCTCAGCCG GTACGGGCTG TCCGAGCGCG GCGACCAGCT GTTCGACAAC CTGTCCGGCG GGCAGCAGGC GCGGTTCCAG GTGCTGCTGC TGGAGCTGTC CGGGTCGACG CTGCTGCTGC TCGACGAGCC GACCGACAAC CTGGACCTGA ACTCGGCCGA GGCGCTCCAG CAGGCGCTGG AGGAGTTCAC CGGCACGGTC GTCGCGGTCA CCCACGACCG CTGGTTCGCC CGCTCGTTCG ACCGGTTCCT GCTGTTCCGG TCGGACGGCG AGGTGGTGGA GGTGGGCGAG CCGGTGTGGG ACGAGCAGCG GGTGAAGCGG GCGCGCTGA
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Protein sequence | MWPVGFLDAN GLAYRLPDGR ELFRDVSFKV AANSVVAVVG ANGVGKSTLL KIISGDLAPA AGSVRVQGGL GVMPQFVGSV RDESSVRDLL LSASPAPLRA AAAELDVVEL ALMETDDEPT QMRYASALVA YGEAGGYEAE VLWDVVTVAA LGVPFERARF REVRTLSGGE QKRLVLEALL RGPEQVLLLD EPDNYLDVPG KRWLEQRLVE TGKSVLLVSH DRELLAEAST HVVTVEAHGA WVHTGSFTTW HEARAARIER LAEEWKRWED EHDRLKELVR TLQVQATISE VMAAKYRAMQ TRLRRFEEAG TPPEMPVQER VAPRLRGGRT AVRAVTCESL ELTGLMKAFD TEVFFGDRVA VLGSNGSGKS HFLRLLAGGD VAHTGSLRLG SRVVPGLFAQ THQHPEWLGR TLVDVLWHGE GDRKGLDRGA AMSVLSRYGL SERGDQLFDN LSGGQQARFQ VLLLELSGST LLLLDEPTDN LDLNSAEALQ QALEEFTGTV VAVTHDRWFA RSFDRFLLFR SDGEVVEVGE PVWDEQRVKR AR
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