Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1223 |
Symbol | |
ID | 8325400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1367331 |
End bp | 1368803 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644941768 |
Product | amino acid permease-associated region |
Protein accession | YP_003099021 |
Protein GI | 256375361 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCTG CGCACAGCGG GTTCGGACAG GGGCGGGGCG TCTTCCGGCG CAAACCCGTC CTGGAGGGCG ACAGCCCGCA CCAGGGCGGC GGGCTCACCA GGACGCTCGG CCTCTGGCAG CTCACCGCCA TCGGCGTCGG CGGCATCATC GGCGCCGGGA TCTTCTCGCT CGCGGGCGCG GTCGCCAACA AGACCGCGGG GCCCGCCGTG CTCATCTCGT TCCTCGTCGC GGGCATCGCC AGCGCCGCCG CCGCGTTCTC CTACGCCGAG TTCGCCGGCC TCATCCCGCA GGCGGGCTCG GCCTACACCT ACGGCTACGC CGTGCTCGGG GAGATCGTCG GCTGGTTCAT CGGCTGGGAC CTGCTGCTGG AGTACACCGC GATCGTGGCG GTGGTCGCGA TCGGCATCTC CGGCTACTTC AACGAGCTCC TGAGCCTCCT CGGCCTGCAC CTGCCCGAGT GGATGCTCGG CGCGCCCGGC ACCGAGGCGG GCGAGGCCGC CCCCGGCAGC TACAAGGTGA ACCTGTTCGC CGCCCTGCTG TGCCTGCTGA TCGCGTTCGT CCTCAACCAG GGCATGAAGA ACGCCGCCCG CTTCGAGACC ACCCTCGTCT ACCTCAAGGT CGCGGTGGTC CTGCTGGTCG TGGTGGTCGG CGCGTTCCAC ATCGACACCG CCAACTACAA CCCGTTCTTC CCGTTCGGGA TCTCCGGCGC CCTCACCGGC GCGGCCACGG TGTTCTTCGC CGTCTTCGGC TACGACGCGA TGAGCACGGC CGCCGAGGAG TCCACCGACT CGCGCAAGCA CATGCCCAAG GCGATCCTGT ACTCCCTGGC CATCTCGATG GTGCTGTACG TGCTGGCCTG CCTGGTGCTG ACCGGCATGG TCCCATACTC GCAGGTGGAC ACCGAGAGCG CGTTCGCCAC CGCCTTCGCC GACGTCGGCC TGCCCGCGCT GGGCATCGTC ATCTCCGTCG GCGCGGTCCT GGGCATCACG ACGGTGCTGT TCACGTTCCT CATGGGCGCC GCCCGCGTCG GCTACTCGAT GAGCCGCGAC GGGCTGCTCC CCCGCTGGTT CGCCAAGACC CACCCGACCA AGCACGTCCC CACCCGCACC ACCTGGGTGC TGGGCGTGGC GTCCGCCGTG ATCGCCGGGT TCCTGCCGAT CGCCGAGGCC GCCGAGCTGA CCAACATCGG CATCCTGCTG GCGTTCGTGG TGGTGTGCGT CGCGGTGATC GTGCTGCGCT ACCGCAGGCC GGACCTGCCG CGCACGTTCC GCACGCCGGG GATGCCCGTG GTGCCGATCG TCGGCGTGGT GTTCTCGCTG TGGCTGATCA CCTTCCTGGC CCCGGAGACG TGGCTGCGGT TCGCGGTGTG GTTCGCCATC GGACTGGTCG TCTACTACGC CTACGGCAAG CGGCACTCGG CGCTGGCGGA CCGGACCGAC CGGACCGACC GCGGCGAGCC GGGCTCAGAC TGA
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Protein sequence | MSSAHSGFGQ GRGVFRRKPV LEGDSPHQGG GLTRTLGLWQ LTAIGVGGII GAGIFSLAGA VANKTAGPAV LISFLVAGIA SAAAAFSYAE FAGLIPQAGS AYTYGYAVLG EIVGWFIGWD LLLEYTAIVA VVAIGISGYF NELLSLLGLH LPEWMLGAPG TEAGEAAPGS YKVNLFAALL CLLIAFVLNQ GMKNAARFET TLVYLKVAVV LLVVVVGAFH IDTANYNPFF PFGISGALTG AATVFFAVFG YDAMSTAAEE STDSRKHMPK AILYSLAISM VLYVLACLVL TGMVPYSQVD TESAFATAFA DVGLPALGIV ISVGAVLGIT TVLFTFLMGA ARVGYSMSRD GLLPRWFAKT HPTKHVPTRT TWVLGVASAV IAGFLPIAEA AELTNIGILL AFVVVCVAVI VLRYRRPDLP RTFRTPGMPV VPIVGVVFSL WLITFLAPET WLRFAVWFAI GLVVYYAYGK RHSALADRTD RTDRGEPGSD
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