Gene Amir_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1144 
Symbol 
ID8325319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1274328 
End bp1275104 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content79% 
IMG OID644941690 
Productputative lipoprotein 
Protein accessionYP_003098945 
Protein GI256375285 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2045] Phosphosulfolactate phosphohydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGGAC AACAGGGTTG CCGGGTCAGG CTGGAGTGGG GCGGCGAGGG GGTGTCCGCG 
CTGGGCGGTG AGTGCGCGGT CCTCGTGGTG GTCGACGTTC TGTCGTTCAC GACGGCGGTG
GACATCGCCG TAAGCCGGGG CGCGAGCGTG CGGCCGGTGG TGTGGGACGA GCGGGGCTCG
GTCGTCGGGT CGCGGTGGGC GCTGCGGCCC TCGTCGCTGC TGGAGGTCCC GCCGGGCGAG
GAGGTCGTGC TGGCCTCGCC CAACGGGGCG ACGCTGTGCG CGCTCGCCGG GGCGACGGGG
GCGGTGGTGC TGGCCGGGTG CCTGCGCAAC GCGGGCGCGG TGGCCGCCGC CGCGGTGGAG
CTGGCGGGCG GCGGGCCGAT CGGGGTGGTC CCGGCCGGGG AGCGGTGGGG CGTGGACCTG
ACCTCGGGGA CTCCCGCCTC GGCGGGACCG CTGCGGCCGT GCGCCGAGGA CCTGCTGGGC
GCGGGCGCGG TCGTGGCCGG GCTGGTGGGG GCGCTGGCGG GCGAGGACGA CCTGCCGCAG
GACGGGCTGC TGTCGGTCGA GGCGCGGCTG GCCGCGACGG CGTGGGCGGG CGCCGACGTG
GCGGTGGCGC TGCGCGGGTG CGGCTCGGGG CGGGAGCTGA TCGCGGCGGG GCGCACGGCC
GACGTCGAGC TGGCGGCGCT GGTCGGCGCG AGCACGTCCG CGCCCCGGCT CGTCGACGGC
GTGCTGCGGG CGCACTCACC CGGACGGGTG CCCGATCAAC GGCCGGAAAG CGCTTAA
 
Protein sequence
MFGQQGCRVR LEWGGEGVSA LGGECAVLVV VDVLSFTTAV DIAVSRGASV RPVVWDERGS 
VVGSRWALRP SSLLEVPPGE EVVLASPNGA TLCALAGATG AVVLAGCLRN AGAVAAAAVE
LAGGGPIGVV PAGERWGVDL TSGTPASAGP LRPCAEDLLG AGAVVAGLVG ALAGEDDLPQ
DGLLSVEARL AATAWAGADV AVALRGCGSG RELIAAGRTA DVELAALVGA STSAPRLVDG
VLRAHSPGRV PDQRPESA