Gene Amir_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1012 
Symbol 
ID8325183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1125224 
End bp1125994 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content76% 
IMG OID644941555 
Productbeta-lactamase domain protein 
Protein accessionYP_003098814 
Protein GI256375154 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTGA GCGTGCTGGG CTGTGCGGGG AGCGTCCCCG GCCCCGGCAC GCCGACGTCC 
GGCTACCTGG TCGAGGCCGG TGGCGCGCGG GTGGTCCTGG ACCTGGGCAG CGGCGTGTTC
AGCGGGCTGC TGCGCCGCTG CGACCCGTTC GACCTGGACG CCGTGCTGCT CTCGCACCTG
CACCTGGACC ACTGCGCGGA CTTCAGCGCG CTGGCCACCT ACCGCCGCCA CCACCCCGAG
CCGCCGTACG ACCCCTCGTC GCGCCGGTTA TCCGTGCTGG CCCCCGGCCA CGCCCCCGAG
CGCCTGGCCG CCGCGCACGC CGCGAGCCGG GCCGACCTGG AGCGGCTGCG CCTGGACGAG
CTGTTCGACT TCACCCCGCT GGCGGCCGGT CGGCACCGGA TCGGCCCGGT GGAGGTCGAG
GTGGCCAGGA TGCGGCACAT CTGCGAGGCG TACGCGTTCC GGCTCACCCA CGGCGGCCGG
TCGCTGGTGT TCAGCGGCGA CACCGTGCAG TGCGGGGAGC TGGTCGAGCT GGCCAGGGGC
GCCGACCTGC TGCTGGCCGA CGCGGCCTGG CGCGAGCAGG CGGGGCGCGC CGACCACCTG
CACATGAGCG GCAAGGAGGC CGCCTCGGTG GCCGCCGAGG CCGGGGTGGG CAGGCTGCTG
CTCACCCACG TGCTGCCCTG GTCGGACGAG CAGGGCGTGC TGGCCGACGC GGTGGCCGAG
TTCGCGGGCC CCGTCGAGCT CGCCCGGCCG GACGCGGTGT ACGAGGTCTA G
 
Protein sequence
MRLSVLGCAG SVPGPGTPTS GYLVEAGGAR VVLDLGSGVF SGLLRRCDPF DLDAVLLSHL 
HLDHCADFSA LATYRRHHPE PPYDPSSRRL SVLAPGHAPE RLAAAHAASR ADLERLRLDE
LFDFTPLAAG RHRIGPVEVE VARMRHICEA YAFRLTHGGR SLVFSGDTVQ CGELVELARG
ADLLLADAAW REQAGRADHL HMSGKEAASV AAEAGVGRLL LTHVLPWSDE QGVLADAVAE
FAGPVELARP DAVYEV