Gene Amir_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0944 
Symbol 
ID8325113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1049362 
End bp1050465 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content70% 
IMG OID644941489 
Productpeptide chain release factor 2 
Protein accessionYP_003098749 
Protein GI256375089 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTTGG ACGTCGAGGC AGACATCAAG GACCTCTCCG CGACGCTCGC CAGCATCGAG 
GCGGTGATGG ACCTCGACGC TCTGCGCGCT CAGGTCGCGG AGCTGGAGGA GCAGGCGGCG
CGACCCGACC TGTGGGACGA CCAGGAGAAG GCGCAGCGCG TCACCAGCCA GCTCTCCCAC
AAGCAGGGCG AGCTGCGCCG CGTGACCGCG CTGCGCGGCA GGCTGGACGA CCTCGGCGTG
CTCTACGAGC TGGCCGAGGA CGAGGGCGAC GAGGGCAGCG CCGCCGAGGC GGACACCGAG
CGGGCCAAGC TCCGCGAGGA GATCTCCTCC CTGGAGGTCC GGACCCTGCT CTCCGGCGAG
TACGACGCCC GTGACGCGCT GGTCACGGTG CGCGCCGAGG CCGGTGGCGT CGACGCGGCG
GACTTCGCCG AGATGCTGCT GCGCATGTAC TCGCGCTGGG CGGAGCGCCA CAACTACGCG
GTCGACGTCT TCGACACCTC CTACGCGGAG GAGGCGGGCA TCAAGTCCGC CACCTTCCGC
GTCACCGCGC CCTACGCGTA CGGCACCCTC AGCGTCGAGC AGGGCACGCA CCGGCTGGTG
CGCATCTCGC CGTTCGACAA CCAGGGCCGC CGCCAGACCT CGTTCGCGGG CGTCGAGGTC
GTGCCGGTGG TCGAGCAGAC CGACCACGTC GAGATCGACG AGAAGGAGCT GCGCGTCGAC
GTCTACCGCT CCTCCGGTCC CGGCGGGCAG GGCGTCAACA CCACCGACTC GGCCGTGCGC
CTGACGCACA TCCCGACCGG GATCGTGGTG TCCTGCCAGA ACGAGCGCTC GCAGCTGCAG
AACAAGGCGA CCGCGATGGC CGTCCTGCAG GCGAAGCTGC TGGAGCGCCA GCGCCAGGAG
GAGCAGGCCA AGATGGACGC CCTCAAGGAC AGCGGTTCCA GCTGGGGCAA CCAGATGCGC
TCCTACGTGC TGCACCCCTA CCAGATGGTC AAGGACCTGC GCACCGAGCA CGAGGTCGGC
AACCCGTCCG CCGTGCTCGA CGGCGAGATC GACGACTTCC TGGAGGCGGG CATCCGCTGG
CGCAAGCAGC GGCAGACGGC CTGA
 
Protein sequence
MNLDVEADIK DLSATLASIE AVMDLDALRA QVAELEEQAA RPDLWDDQEK AQRVTSQLSH 
KQGELRRVTA LRGRLDDLGV LYELAEDEGD EGSAAEADTE RAKLREEISS LEVRTLLSGE
YDARDALVTV RAEAGGVDAA DFAEMLLRMY SRWAERHNYA VDVFDTSYAE EAGIKSATFR
VTAPYAYGTL SVEQGTHRLV RISPFDNQGR RQTSFAGVEV VPVVEQTDHV EIDEKELRVD
VYRSSGPGGQ GVNTTDSAVR LTHIPTGIVV SCQNERSQLQ NKATAMAVLQ AKLLERQRQE
EQAKMDALKD SGSSWGNQMR SYVLHPYQMV KDLRTEHEVG NPSAVLDGEI DDFLEAGIRW
RKQRQTA