| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0939 |
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| Symbol | |
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| ID | 8325105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1042388 |
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| End bp | 1043548 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941481 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003098744 |
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| Protein GI | 256375084 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGAGC GCAGCGACAC CGGACACGAC AGCGCGCCCG AGGAGACCCT CCAAGCCGAC
CGCCCGCCGG TCGAGGAGGC CCCACCGCCG CCACCGCCGC CACCCGCGCC CGGCGCCCCG
CTGCCCCCGC GCAGGACCGG TCTGACCAGG CGCACGTGGA CGCTCGTGAT CAGCCTCGTG
CTGGTGCTCG TGCTCGGCCT GCTCGGCGGT TTCGCCCGCG TCCCGTACGT CGCGCTCGGC
CCCGGCCCCA CCTACGACAC GCTCGGCGAG GCGGGTGGCC GCCAGGTCGT GTCCGTCGAC
GGCCAGGAGA CGTTCCCGAC CGGCGGCACG CTCACCATGA CCACGGTCTC GCTCACCGAC
GACGTGTCCC TGTTCGGCGC GCTCGGCCTC TGGCTCAGCG GCCGGTACGC GCTCGCCCCG
CGCGAGGAGT TCTTCCGCCC CGGCGAGTCC GAGCAGCAGG TCCGCGACGA GAACACCCGC
GCGTTCAAGG ACTCGCAGAG CAGCGCCGAG GTCGCGGCGC TCAGCTACCT CGGCTACCCC
AAGAAGGTCC TCGTCGCCGA GATCACCAAG GGCACCCCGG CCGACGTCGC CCTCCAGCCC
GACGACCAGC TCGTCGAGGT CAACGGCAGG CAGATCACCG CCGCCGACCA GGTGCGGCCC
GCGCTGGAGT CCACCAAGCC CGGCGACCAG GTCGACCTCG TCGTCCTGCG CGACGGCGAG
CGCAAGACCG CCCGCGTCAC CCTCGCCCAG GCCGGGGACC GCGAGACCGG CTTCCTCGGC
ATGGTCCCGG CCGACCGCGC CGACGTCCCG TTCGACGTCA CCATCAGCCT GTCCGACGTC
GGCGGCCCCT CCGCGGGCCT GATGTTCGCG CTGTCCATCG TGGACAAGCT GACCCCCGGC
GAGCTCAACG GCGGCAAGCA CGTCGCGGGC ACCGGCGAGA TCACCCAGAC CGGCGAGGTC
GGCCGCATCG GCGGCATCCC GTTCAAGATG GTCGCCGCGC GCGAGGGCGG CGCCGAGGCG
TTCCTCGTGC CCGACGGCAA CTGCGAGGAG GCCAGGCAGA ACGCCCCCGA CGGGCTCAGG
CTGATCCGGG TCAAGAACCT GCAGGACGCC GTGACCTCGC TGGAGGCGCT GGCCAAGGGC
GGCGACACGC CCGGCTGCTG A
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| Protein sequence | MSERSDTGHD SAPEETLQAD RPPVEEAPPP PPPPPAPGAP LPPRRTGLTR RTWTLVISLV
LVLVLGLLGG FARVPYVALG PGPTYDTLGE AGGRQVVSVD GQETFPTGGT LTMTTVSLTD
DVSLFGALGL WLSGRYALAP REEFFRPGES EQQVRDENTR AFKDSQSSAE VAALSYLGYP
KKVLVAEITK GTPADVALQP DDQLVEVNGR QITAADQVRP ALESTKPGDQ VDLVVLRDGE
RKTARVTLAQ AGDRETGFLG MVPADRADVP FDVTISLSDV GGPSAGLMFA LSIVDKLTPG
ELNGGKHVAG TGEITQTGEV GRIGGIPFKM VAAREGGAEA FLVPDGNCEE ARQNAPDGLR
LIRVKNLQDA VTSLEALAKG GDTPGC
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