Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0880 |
Symbol | |
ID | 8325043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 970879 |
End bp | 971616 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941422 |
Product | protein of unknown function DUF164 |
Protein accession | YP_003098687 |
Protein GI | 256375027 |
COG category | [R] General function prediction only |
COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGCCG ATCCCGTTGT GCAGCGCAGG CTGCTCGACC TCGCGCGGGT TGACACCGAG CTGGCGCGGG TCGAGCACCG CCGCCGCACG CTGCCGGAGA TCGTGGAGAT CGCCGAGGCC GAGAAGCAGG TGCGCGCCAA GCAGGACGCG CTCACCGCGG TCGAGACGAC CCTGGGCGAC CTGGACCGCG ACGTCAAGCG CCAGGAGACC GAGATCGACC AGGTCCGCGC CCGCGAGGAG CGCGACCGGG GGCTCCTGGC GGGCGGCAGC GTCGGCGCCA AGCAGCTCAC CGACCTGGAG CACGAGCTGG CCACCCTCGG CCGCCGCCGC GGCGCGCTGG AGGACGACCT GCTGGAGCTG ATGGAGCGCC GCGAGGCCGT CGAGGTCGAC AGCCAGCACG CCTCCGCGCA GTTCGCGAAC GCCCAGGAGA CCCTGGCCGA CGCCGCCCGC AGGCGCGACT CCGCGCTCGC CGACCTGGAG TCCACCGAGG CCAAGCGCAC CGCCGAGCGC AAGACCATCG CGTCGACCTT CGAGGCCCCG CTGCTGGCGG TCTACGACCG GGTCCGGCTG CACAAGGGCA CCGGCGCGGC GCTGCTCCAG TCCCGCCGCT GCGGCGCGTG CCGCATCGAG CTGGACCGCA GCGCGATCGC CAAGGTCAAG GAGGCGCTCG CCGACGACGT CGTGCAGTGC GAGGAGTGCG GCGCGATCAT GGTGCGCACC GGGGAGTCCG GTCTGTGA
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Protein sequence | MKADPVVQRR LLDLARVDTE LARVEHRRRT LPEIVEIAEA EKQVRAKQDA LTAVETTLGD LDRDVKRQET EIDQVRAREE RDRGLLAGGS VGAKQLTDLE HELATLGRRR GALEDDLLEL MERREAVEVD SQHASAQFAN AQETLADAAR RRDSALADLE STEAKRTAER KTIASTFEAP LLAVYDRVRL HKGTGAALLQ SRRCGACRIE LDRSAIAKVK EALADDVVQC EECGAIMVRT GESGL
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