Gene Amir_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0553 
Symbol 
ID8324712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp596361 
End bp597458 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content76% 
IMG OID644941097 
ProductAIG2 family protein 
Protein accessionYP_003098366 
Protein GI256374706 
COG category[S] Function unknown 
COG ID[COG2105] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0870492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGCA TACGGAAGCA CACGGCTAGC GGGGCGGCAC TGGCGCTGCC CTTCACGGAC 
GACCGGCACC CCGCGGAGCC CTACCCCGGC GCTCGGCCGG GTGCCTGCTT CGTTCACCTG
GACGGTGCGG GTTGGCCGGT AGACCCGGAC CCGATGACTG ACTCGGGGTG GCGGGTTTCC
CCCGACGGGG TGGACCTGGA CGAGTGGCTG GCCGGGCACG GCGAGCCGCC GATGGCGGAG
CGGACCCCGG TGCTGGCCTA CGGGTCCAAC GCCAACCCCG CCAAGGTCAC CTGGTTGCGC
GAGGAGCTCG GTCTCACCGG TCCCGCGGTG GTGCTGCGCG CCAGGTGCGA GGGGCTGGCG
GCGGTGTGGG CCTCGGGCCT GCGCAAGGTC GACGGCCAGC GGCCCGCGAC CCTGGCCGCC
ATGCCGGACG TCACCGAGGA GCACGCGGTC TGGTTCGCGA CCGCCGAGCA GCTGCGCGTC
CTGGACCGCT GCGAGGGGCG CGGGCTGCGC TACCGGCTGG TCCGCGTGCA CAGCGGCCGG
GTCACCCTGT TCGACGGCTC GGTGGTCGAC TCGGTGCTCG CCTACACCGG CGCGGGCCGC
AGGCGGATGC CGCTGCTGTC GGCCGGTGAG CCGGTGCGCT GCGCCGAGGT CGACCAGGTG
GGGGCGCGCT GGCTCGGCGG GCGGCCCGCG CCCGACGACG GCCTCGACGT CACCCCGGTC
CACGGCTACC CGGCGCCCGA CGAGTGGCCG GACCGCCTGT TCGCCTACGG GACGCTCCAG
CCGGGGCAGA GCGCGTGGGG GCTCGTCGAG CCCCTCACCA GCGGCTCGCC CGAGCCCGCG
CGGGCGTCCG GGACGCTGCA CGACACCGGG CTCGGCTACC CGGCGCTGCG CCCCGGCGGC
GGGGGCGCGA ACGTGCCGGG CCACGTGCTG CGGCTGACCT CGCCGGAGGA GGCGCTGCCG
GTGCTGGACA AGTACGAGGG CGACGAGTAC CGGCGGGTCC GGGTGACCCT GCCGGACGGG
CGGGTGTGCT GGACGTACCT GTGGCGCGGG CCGGTCGACG GGTTCGCGGA GCTGCCGGAG
GGGTGGGTGC GACGGTGA
 
Protein sequence
MGGIRKHTAS GAALALPFTD DRHPAEPYPG ARPGACFVHL DGAGWPVDPD PMTDSGWRVS 
PDGVDLDEWL AGHGEPPMAE RTPVLAYGSN ANPAKVTWLR EELGLTGPAV VLRARCEGLA
AVWASGLRKV DGQRPATLAA MPDVTEEHAV WFATAEQLRV LDRCEGRGLR YRLVRVHSGR
VTLFDGSVVD SVLAYTGAGR RRMPLLSAGE PVRCAEVDQV GARWLGGRPA PDDGLDVTPV
HGYPAPDEWP DRLFAYGTLQ PGQSAWGLVE PLTSGSPEPA RASGTLHDTG LGYPALRPGG
GGANVPGHVL RLTSPEEALP VLDKYEGDEY RRVRVTLPDG RVCWTYLWRG PVDGFAELPE
GWVRR