Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0550 |
Symbol | |
ID | 8324709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 593919 |
End bp | 594908 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644941094 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003098363 |
Protein GI | 256374703 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.644349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAGT TGGAGCTGCG CCACCTGCGC GCGGTGTGCG CGATCGCCGA GGAGGGCAGC CTCACCAAGG CCGCCTCGCG GCTGGGCCTC ACCCAGCCGG CCATGAGCGC CCAGCTGCGC ACGGTCGAGC GGATCGTCGG CGGCAGGCTG TTCGAGCGCA CGCCCGGCGG CAGCGTGCCC ACCGAGCTGG GCAGGCAGGT CGTCGGCTCG GCCAGGCTCG TGCTGGACGA GGTCGGCGGG CTGGTGCGGC TGGCCAGGGA GCGCAGCTCG GGCGCCGACC GGGGTCCGCT GCTGGTGGGG AGCGTGCCGA CGCTGTTCTT CGGCGACCTC GTCACCGAGC TGCGCCGCGC CGTTCCCGGC GTCGAGATCC GCACCGAGAC CATGCAGGGC GGGTCCGAGC TGCTGGAGAA GCTGGTCGCG GGCCAGTTCC ACGTGGCGGT GCTCGACTGG TTCGAGGGCC TGGACACCCG CGAGCTGCGC GGCGTCGAGG TGCGCAGGCT GGTGAGCGAA CCGCACTTCG TGGCGCTGCC CGAGTGGGAC CGGCTCGCCC GGCAGGACGA GGTCGACCTC GCCGAGCTGG CCGACCGCGA CTGGGTCACC CCGCCCGACC AGTTCATCGG CAACCGGCTG CAGATCGTCG CCGCGTGCGC GGGCGCCGGG TTCACGCCCC GGTTCACCCA CCACGCCAAC GAGGCCAGCA GCGCGCGCGG GCTCGTCGCC AGCGGCGCGG TGTGCTTCGC GCTCCCGCAG TCGCGGGGCG GCGACGGCAT CGTGGTCAAG CCGCTCAAGG GCTCGCCGCT GCTGATCGAC GTCCTGGTGG CGACCCGCCG CGACGGCCCG GTCGCGGGGC GGGCCCACGA GGTCTACGCG TGCGCGGCGC GGGCGTACCG GGCGCTGCTG CCGAGGAACC CGGCGTTCGA GAAGTGGTGG GCCGACCACC CGGAGGCCCA CGCCGAGCTG GACACGGCGC TGCTGGTCGA CCCGGCGTGA
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Protein sequence | MPELELRHLR AVCAIAEEGS LTKAASRLGL TQPAMSAQLR TVERIVGGRL FERTPGGSVP TELGRQVVGS ARLVLDEVGG LVRLARERSS GADRGPLLVG SVPTLFFGDL VTELRRAVPG VEIRTETMQG GSELLEKLVA GQFHVAVLDW FEGLDTRELR GVEVRRLVSE PHFVALPEWD RLARQDEVDL AELADRDWVT PPDQFIGNRL QIVAACAGAG FTPRFTHHAN EASSARGLVA SGAVCFALPQ SRGGDGIVVK PLKGSPLLID VLVATRRDGP VAGRAHEVYA CAARAYRALL PRNPAFEKWW ADHPEAHAEL DTALLVDPA
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