Gene Amir_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0386 
Symbol 
ID8324545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp423636 
End bp424412 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID644940930 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003098199 
Protein GI256374539 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGAGT TGGACAGCTA CGTCGCGGTG GGGGACAGCT TCACCGAGGG CCTGGACGAT 
CCAGCACCCC ACGGCGGGTA TCTCGGGTGG GCCGACCGGT TGGCGGCCAT GATCTCCTCG
CGCCAGCGGG GGTTCAGGTA CGCCAACCTG GCGATCCGGG GCAGGTTGCT CCAGGCGATC
GTGGAGGAGC AGGTCCCGGT CGCGGTGGCG CTCAAGCCGA GCCTGGTGAC GTTCTGCGCG
GGCGGGAACG ACCTGCTCAT GCCAGGGGCG GACCCGGACG CGGTGGCCGA GGTGTACGAG
ATCGCGGTGG CCGAACTGCG GGCCACGGGC GCGGAGGTCG TGATCTTCAC GGGCTTCGAC
CCGAGGCACG CGCCGGTGCT GCGCTCGCTG CGGGGCAAGG TGGCGATCTA CAACTCGCAC
CTGTGGTCGG TGGCCGAGCG CTACAACTGC AAGGTCGTGG ACCTGTGGTC GATGACGGTG
CTGCACGACA TCAGGGCGTG GGGTCCGGAC CGGCTGCACC TGGCGCCCGA GGGGCACCAG
CGGGTGGCGC TGCGGGTGGC CGAGCTGCTC GGCCACGAGC AGGAGGAGCA GTGGCGCACG
CCGTGGCCGG TGGTCGCCGA GGACGACTGG ATGACCCAGC GCAGGCAGGA CCTGAAGTGG
GCACGGGAGC ACGTGGTCCC GTTCATCACC AGGCACCTGC GGGGCGCGTC GCTCGGTGAC
GGCGTCGTGC CGAAGCGGCC GGAGCTGCTG CCGATCAGCA GCGGCGAGAA CAACTAG
 
Protein sequence
MQELDSYVAV GDSFTEGLDD PAPHGGYLGW ADRLAAMISS RQRGFRYANL AIRGRLLQAI 
VEEQVPVAVA LKPSLVTFCA GGNDLLMPGA DPDAVAEVYE IAVAELRATG AEVVIFTGFD
PRHAPVLRSL RGKVAIYNSH LWSVAERYNC KVVDLWSMTV LHDIRAWGPD RLHLAPEGHQ
RVALRVAELL GHEQEEQWRT PWPVVAEDDW MTQRRQDLKW AREHVVPFIT RHLRGASLGD
GVVPKRPELL PISSGENN