Gene Amir_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0312 
Symbol 
ID8324470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp340597 
End bp342291 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content75% 
IMG OID644940857 
Productvon Willebrand factor type A 
Protein accessionYP_003098127 
Protein GI256374467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCC GCAGCGAACG CCCCGGCCGC GCCCGGCGGA TCGCACTGCC CCTGGGGGCC 
CTGGTCGGCG TGCTCGCCGC GGGGGCCACC GCCGTGGTCG CGCTGAAGGC GACCAGCGGC
CCGGACTGCA CCGGCACCCT CCCGCTCAAG GTCGCCACCA CCCCGGCCGC CGAGGCGGTC
GTGCGCGGCG CGGCCGACGA CTACCAGGCC ACCCAGCCCG TCGTGGACGG CCGGTGCGTG
CAGGTCCAGG TCGAGGCGCG CACCGCCGCC GACGTGGCGC ACGAGCTGCC GACCGCCCGG
ATCAACCCGC CCGTCATGTG GGTCCCGGAC TCGACCATGT GGGCCGAGGA GGCCCAGCGC
CAGTCCGCGA GCCTGGGCGC CGAGGCGCCC GCGCTGGAGG TCGGCGAGCC GCTGGCCGGG
TCCCCGCTGG TCATCGCGGG TCCGGCGGAG AAGCTGCGCG GGCTGGGCTG GCCGAGCACC
TCGGTCGCCT GGGCCAGCGT GCTCGCGCCC GGCGTGGAGG CCGCGGTGAG CGACCCGACC
ACCTCCACCG AGGGCCTGGC CACCCTGGCG GTCATCCGCG CCAGGCTCGG CAACGCGGAC
GGCACGCCCA ACCAGGAGCT GATCGGCTCG CTGATGCGGA TCGGGCGCAA CGCCGTGACC
GTGCGCGACT CCTTCAACCG GGTCGGCCAG GACGAGGGGA GCGCGCCGCT GTTCACCGCC
TCCGAGCAGG CCGTGCTGGC CGCGAACCGG GCGGCCGGCG GGCTGCGGGT CGCCGCCTCC
TACCCGGCCG AGGGCACGAT GCTGCTCGAC TACCCGGTGG TGCGGATCAA GCGCGCCTCC
GACCAGCCGG GCACCGGGGT CGCGGCGAGC GGCTTCGAGC AGGCGCTGCG CAGCGCCAAG
ACCCGCGAGC GGTTCGTGGA CGCGGGCTTC CGCACCCCGG ACGGGCAGGC GGCGGCCGGG
CTGTCGGCCG AGCGCGACGG GGTCGGCGGC GACGCGGTGA ACGCGATGCC GAAGCCGAGC
CCGGCCGAGG TGTCCGAGCT GCTGGGCACC TGGGGCGCGG TGAGCCTGGA CTCGCGGATG
CTCGCGGTGC TGGACGTGTC CGGCTCGATG ACCGAGCTGA TGGGCAACGG CCAGACCCGC
ATGGCGGCGG CGTCCGAGGC GGCGCTGACC GCGCTGGGGA TGCTGCCGGA CACCTCGGAG
ATCGGCCTGT GGGCGTTCTC CACGAACAAG AGGCCGCCGA ACGACTGGGT CGAGCTGGTG
CCGCTCGGCC CGCTCGGCGA GGTGCTGGGC AGCGCGCCGA GGCGGACGCG GCTCCAGCAG
GGCGCCAAGG GCCTGGCGGC GCTGGTCGGC GGCGGGACCG CGCTGAACGA CACCACGCTC
GCGGCGTTCC GGAGGATGCA GTCCACGTAC GACCCCGAGA AGATCAACTC AGTGGTGCTG
ATCACCGACG GCCGCAACGA CGACTACGCC AGCATCACCA CCGCGCAGCT GCTGCAGGCG
CTGGAGTCGG AGTCCGACCC GGCGCGCCCG ATCCCGCTGA TCATGGTCGG GCTGGGCCAG
GAGGCCGACA TGGAGGCGCT GCAGGAGATC TCCTCGGCCA CCGGCGGCAA GGCCTACCAG
GCGCTGGAGG CGGCCGACAT CCGCAGCGTG CTGCTGGACG CGATCTCCCA GCGGCGGTGC
AGGCCCAACT GCTGA
 
Protein sequence
MSARSERPGR ARRIALPLGA LVGVLAAGAT AVVALKATSG PDCTGTLPLK VATTPAAEAV 
VRGAADDYQA TQPVVDGRCV QVQVEARTAA DVAHELPTAR INPPVMWVPD STMWAEEAQR
QSASLGAEAP ALEVGEPLAG SPLVIAGPAE KLRGLGWPST SVAWASVLAP GVEAAVSDPT
TSTEGLATLA VIRARLGNAD GTPNQELIGS LMRIGRNAVT VRDSFNRVGQ DEGSAPLFTA
SEQAVLAANR AAGGLRVAAS YPAEGTMLLD YPVVRIKRAS DQPGTGVAAS GFEQALRSAK
TRERFVDAGF RTPDGQAAAG LSAERDGVGG DAVNAMPKPS PAEVSELLGT WGAVSLDSRM
LAVLDVSGSM TELMGNGQTR MAAASEAALT ALGMLPDTSE IGLWAFSTNK RPPNDWVELV
PLGPLGEVLG SAPRRTRLQQ GAKGLAALVG GGTALNDTTL AAFRRMQSTY DPEKINSVVL
ITDGRNDDYA SITTAQLLQA LESESDPARP IPLIMVGLGQ EADMEALQEI SSATGGKAYQ
ALEAADIRSV LLDAISQRRC RPNC