Gene Ajs_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3343 
Symbol 
ID4674354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3535230 
End bp3535718 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content70% 
IMG OID639840383 
Producthypothetical protein 
Protein accessionYP_987541 
Protein GI121595645 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0788741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCCC AACCGCTCGT CTCCCGCATC GCCGTCGCCG CCACCCTGCT CGTGGCCGGC 
GCAGCCCACG CCCAGGTCAC CGTGCAGGAC GCCTGGGTGC GCGCCACGGT GCCGCAGCAG
AAGGCCACCG GCGCCTTCAT GCGCCTGACG GCCGCGCAGG ATGCCCGCCT GGTCAGCGCC
AGCAGCCCGG TGGCCGGCGT CACCGAAGTC CATGAAATGA AGCTCGTGGA CAACGTGATG
AAGATGCGCC CGCTGCCCGC GCTGGATCTG CCAGCCGGCC AGGCCGTGGA ACTCAAGCCC
GGCGGCTACC ACATCATGCT GCTGGACCTG AAGCAGCCCG TCGCCCAAGG CTCGACCGTG
CCCCTGACGC TGGTTTTCGA AGCCAAGGAT GGCCAACGCA CGACACAGGA GTTGCAGGCG
CCCGTGCGCG CCGTCAGCGC CACGGCCGCG CCGGCCATGG GCCATGGCAA GCCGCACGGC
GGCCATTGA
 
Protein sequence
MFSQPLVSRI AVAATLLVAG AAHAQVTVQD AWVRATVPQQ KATGAFMRLT AAQDARLVSA 
SSPVAGVTEV HEMKLVDNVM KMRPLPALDL PAGQAVELKP GGYHIMLLDL KQPVAQGSTV
PLTLVFEAKD GQRTTQELQA PVRAVSATAA PAMGHGKPHG GH