| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2832 |
|---|
| Symbol | |
|---|
| ID | 4673235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2999205 |
|---|
| End bp | 3000146 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639839889 |
|---|
| Product | nitrate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_987049 |
|---|
| Protein GI | 121595153 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.442547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGTG CCGTCTTTCA CAGCCCGCTG GAGCCGCAAG CGCCGGCCGG CGCGTCCGAT
GCTTCCAAAC CGATAGCTGT TAGCGCCCAT CCCACAAGCG CTGCAGACCC AAAAGCCTCA
GGGCCTGCCA GCCCACCCCC GCGCAGCGAC GCGCGCCAGC GCTGGAACGC CCTCTGGCTG
GCCGTGCTGC CGCCGCTGTG CGGCGTGGGC CTGCTGCTGG GCCTGTGGGC CGTGGTCTCG
GCCACCACGG GCCAGAGCAT TCCTGGCCCG CTGCAGACCT GGGCGCAGGC GGTGGAGATC
TTCAGCGACC CGTTCTACCG CAACGGCCCC AACGACCAGG GCGTGGGCTG GAACGTGCTG
GCCAGCCTGC AGCGCGTGGC CGTGGGCTTC GGCCTGGCCG CGCTGGTGGG CATACCGGCG
GGCTTCGTGA TCGGGCGCTT CGCGTTCCTC TCGCGCATGT GCAACCCGGT CATCAGCCTG
CTGCGGCCCG TCTCGCCGCT GGCGTGGCTG CCCATCGGCC TGCTGGTGTT CAAGGGCGCC
AACCCGGCCG CCATCTGGAC GATCTTCATC TGCTCCATCT GGCCCATGGT CATCAACACC
GCCGTGGGTG TGCAACGCGT GCCGCAGGAC TACATGAACG TGGCGCGCGT GCTCAACCTG
AGCGAATGGA AGATCGCCAC CACCATCCTG TTCCCGGCGG TGCTGCCCTA CATGCTGACC
GGCGTGCGCC TGGCCGTGGG CACGGCCTGG CTGGTGATCG TGGCGGCCGA GATGCTCACC
GGCGGCGTGG GCATCGGCTT CTGGGTGTGG GACGAGTGGA ACAACCTGAA CGTCACCAAC
ATCCTGGTGG CCATCTTCGT CATCGGCGGC GTGGGCCTGC TGCTGGAATG GGCGCTGGTC
CGGCTGGCCA CGGCCTTCAC GTTCGAGGAG GTGCAATCAT GA
|
|---|
| Protein sequence | MVSAVFHSPL EPQAPAGASD ASKPIAVSAH PTSAADPKAS GPASPPPRSD ARQRWNALWL
AVLPPLCGVG LLLGLWAVVS ATTGQSIPGP LQTWAQAVEI FSDPFYRNGP NDQGVGWNVL
ASLQRVAVGF GLAALVGIPA GFVIGRFAFL SRMCNPVISL LRPVSPLAWL PIGLLVFKGA
NPAAIWTIFI CSIWPMVINT AVGVQRVPQD YMNVARVLNL SEWKIATTIL FPAVLPYMLT
GVRLAVGTAW LVIVAAEMLT GGVGIGFWVW DEWNNLNVTN ILVAIFVIGG VGLLLEWALV
RLATAFTFEE VQS
|
|---|
| |