Gene Ajs_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1316 
Symbol 
ID4674123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1384182 
End bp1384742 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content65% 
IMG OID639838428 
Producthypothetical protein 
Protein accessionYP_985612 
Protein GI121593716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.321266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.18558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAT CGCATCCGCT CAACCAGGCC GTGATCGCCC AGGCGCTGTA TGACCTTCGC 
AACGGCCAAC TGCGCCGCTG CAAGGCCATG GGCTTCGGCG AGGCCGAGCT GGATGCGCTC
AAGCACCCCG CGCTGATCAG CGTGCTGGCC AACGCCAGCG TCTCGTGGTG CTCGGTCACG
GTCAACCGCG AAGTGCTGCA GCGCCTGCTC AACCAGGCAC AGGACGTGGA GAAGGAAATC
GCCACGGTCG ATCGCATGCT GCGGCTGGGG GCCAGCACGG AGATGGTCAG CCGCTTCTAT
GGCCTGACCC ATCAGGAAGT CGCCCTGCGG CGGGAGATCC TCGGCCTGCC CAAGCGCAAG
GGGCGCCACC CCGTCCTGGA CGAGACCCAG GACACCGAAC TGTGGCGGCA ATGGAAAGCC
GTGACCAGCA GCAGGAACGT CGATCTGGAG GACGAGACCT CGATTCTCGA TGCGGCCATG
GACCTGGCCG AAGGCATGTC GCTGCCTCTG TCGGTGGTCT GGGCCTCGAT CAAGAGCTGG
GTCGATCAGG GATTGGGTTG A
 
Protein sequence
MSTSHPLNQA VIAQALYDLR NGQLRRCKAM GFGEAELDAL KHPALISVLA NASVSWCSVT 
VNREVLQRLL NQAQDVEKEI ATVDRMLRLG ASTEMVSRFY GLTHQEVALR REILGLPKRK
GRHPVLDETQ DTELWRQWKA VTSSRNVDLE DETSILDAAM DLAEGMSLPL SVVWASIKSW
VDQGLG