| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0151 |
|---|
| Symbol | |
|---|
| ID | 4672671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 169220 |
|---|
| End bp | 170137 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639837283 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_984482 |
|---|
| Protein GI | 121592586 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.688141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATGA CCCTGCAGAG CCTCAAATCT ATTGCCCAGC CACTGCTGCA GCGGGTGTTG
CAGCCCATTG CGCCGCTGGT GCGCGCCGTG CAGATGTGGC TGGACGCCGA CGGCCTGCGC
ATGAGCGCGG CGATGTCGTT CTACGGCATG CTGAGCCTGG CGCCGCTGTT GCTGCTGCTG
GTGGGGGTGC TCGGGTGGTG GATCGACCAG GCCTACCTGG AGAGCAATCT CATCGCCCAG
GTGCGCGGGG TGATGGGCGA GCGCGGCGCC GAGGTGGTGC GCCTGGCGCT GGCCAGCGCG
CAGGAGCCGG CCGAGGGGCG CCTCGCGTCG ATGGCCGGCT TCGTGCTGCT GCTGTCGGGC
GCGACGGGGG TCTTCGTGGA ACTGCAGAGC GCGCTGGAGC GGCTGTGGGC ACACGGCCAG
CCCGCGCCCG AGCGCAAGGC GTGGTGGCGC ATGGCCTCCC TGCGCCTGCG AGGCCTGGCC
TATGTGCTGG CCATCGGTTT TCTGCTGCTG GTGTCGCTGG TGTTGTCCAC GGCCATCAAC
GTGCTGGCCA CCTGGGCCAG CGCGCGGCTG CCGTTCGGCT CGGGCACGCT GCTGCAGATC
GTCAATGAGG CCGTGGCCTT CGCCGTGGCG GTGGCGCTGT TCTTGGGGCT GATGCGCATC
GGCAGCGGCC CCAAGCCGCC CACGCATTGC CTGGTATTCG GCGCGGTGGT GGGCGCCACG
CTGTTCACGG TGGGCAAGCA GTTGCTGGCG CTGTACCTGT CCACCGCGGC GGTGGTGTCG
GCCTATGGCG CTGCGGGCTC GCTGGTGGTG CTGCTGATGT GGATCTACTT TTCGTCCGCG
GTGCTGCTGT TCTCGGCCGC CAGCGCGCGG GCGCTGCACG AAACGCGTAC CGCCGCCTCC
GCGCCGGCGG GCCGTTGA
|
|---|
| Protein sequence | MPMTLQSLKS IAQPLLQRVL QPIAPLVRAV QMWLDADGLR MSAAMSFYGM LSLAPLLLLL
VGVLGWWIDQ AYLESNLIAQ VRGVMGERGA EVVRLALASA QEPAEGRLAS MAGFVLLLSG
ATGVFVELQS ALERLWAHGQ PAPERKAWWR MASLRLRGLA YVLAIGFLLL VSLVLSTAIN
VLATWASARL PFGSGTLLQI VNEAVAFAVA VALFLGLMRI GSGPKPPTHC LVFGAVVGAT
LFTVGKQLLA LYLSTAAVVS AYGAAGSLVV LLMWIYFSSA VLLFSAASAR ALHETRTAAS
APAGR
|
|---|
| |