7 homologs were found in PanDaTox collection
for query gene Afer_R0007 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013124  Afer_R0007  SRP RNA; RNA component of signal recognition particle  100 
 
 		 110 bp  218  2e-55  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.24199  n/a   
 
 
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NC_008148  Rxyl_R0053  SRP RNA; RNA component of signal recognition particle  93.02 
 
 		 103 bp  61.9  0.00000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
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NC_014212  Mesil_R0019  SRP RNA; RNA component of signal recognition particle  96.97 
 
 		 107 bp  58  0.0000005  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0274413 
 
 
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NC_011662  Tmz1t_R0010  SRP RNA; RNA component of signal recognitionparti cle  93.75 
 
 		 106 bp  48.1  0.0005  Thauera sp. MZ1T  Bacteria  normal  0.33139  n/a   
 
 
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NC_007492  Pfl01_R30  SRP RNA; RNA component of signal recognition particle  91.43 
 
 		 117 bp  46.1  0.002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.331058  normal  1 
 
 
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NC_008025  Dgeo_R0056  SRP RNA; RNA component of signal recognition particle  93.55 
 
 		 106 bp  46.1  0.002  Deinococcus geothermalis DSM 11300  Bacteria  hitchhiker  0.0000625085  normal  0.583061 
 
 
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NC_009616  Tmel_R0058  SRP RNA; RNA component of signal recognition particle  91.18 
 
 		 105 bp  44.1  0.007  Thermosipho melanesiensis BI429  Bacteria  normal  0.175728  n/a   
 
 
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