Gene Afer_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1936 
Symbol 
ID8324033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp2026080 
End bp2026679 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content68% 
IMG OID644953060 
ProductMethyltransferase type 11 
Protein accessionYP_003110513 
Protein GI256372689 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0477895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGAAG CGATGCGGCA GGTCTGGAAC GCTCGCTACC GAGAGAATGA TCGACTCTGG 
ATCGGCGAGC CGGATCCTGC GATCGTGGGC ATCGTCGAAC GAGTGCAGCC TCGATCGGCA 
GTGGATCTCG GCGCAGGCGA AGGGCGCAAC GCGCTGTGGC TCGCGTCTCG TGGGATCGAG 
ACGACCGCGG TGGACGTGGC TGACGTCGCG CTCGAGCGCC TTGCCCGCGC TGCCGAGGAG 
CAAGGTCTGG CTGTCACGAT CCAACACGCC ACCATCGAGG AGTTTGCCCA GCTCGGCCTC 
CAGTTCGACC TCGTGCTGCT CGCGAACATC CATCCGCCTG CCGAGGAGCG ACGCCGACTG 
CACGCGCTCG CCTTCGGCCT CGCCAGCCCC GGAGGGCGGC TCGTCATCAT CGGCCACCAC 
GTCGACGGGG TCGGCATCGC TGGTCCTCCG GATCCGGATC GGCTCCTCAG CGAGGACGAG 
ATCCGCTCGC AGTTTCCGGA GCGGTCGATC GAACTGCTCG AGGTCGTTCG AGACCGTGCC 
GATCATGGCC ACGTCGCCCC GTCGCTGGTC GCCGTGGTCC GACGCGACGC CGAGCGCTAG
 
Protein sequence
MDEAMRQVWN ARYRENDRLW IGEPDPAIVG IVERVQPRSA VDLGAGEGRN ALWLASRGIE 
TTAVDVADVA LERLARAAEE QGLAVTIQHA TIEEFAQLGL QFDLVLLANI HPPAEERRRL 
HALAFGLASP GGRLVIIGHH VDGVGIAGPP DPDRLLSEDE IRSQFPERSI ELLEVVRDRA 
DHGHVAPSLV AVVRRDAER