Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1684 |
Symbol | |
ID | 8323775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1770443 |
End bp | 1771033 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644952815 |
Product | Lumazine-binding protein |
Protein accession | YP_003110273 |
Protein GI | 256372449 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.137212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCTCGG GGATCGTGGA ACGGACCGTA GCGCTCCTCG AGCGCCGTGA CGGGCGATTG CTGTTCGACC GCAGCGACTG GGATGTCGCC ATCGCCCCAG GGAGTTCCAT CGCCTTCAAC GGGGCGTGCC TCACTGCCGT CGAGATCAGT GACGAGGTGG TCGGAGTCGA CGTCGTGCCC GAGACCCTGC GGCGAACCAA TCTCGGTGCG CTCGAGCCCG GGGTGCTGGT GAACGTCGAG CGGTCGGTGA CGCTCCAGAC GCTGCTCGAT GGCGGCCTCG TGCTCGGCCA CGTCGACGCC GTCGCGACCG TGACGGACGT CGACGACGAA GGCATCGTGG TGCACTACCC CGAGCGGTTC GAGCCGCTCG TCGTCGAGAA GGGCACCATC GTGCTGAACG GGGTTGCGTT GACGGTCGCC GAGCTCGCGC CGGCCTCGGC CAGAGTCGCT CTCATCCCAG AGACGCGACG TCGCACGAAC CTCGGGACCT GCGAGGTCGG TGCGGTGCTC AACATCGAGT TCGACGTCAT CGGGAAGTAC GTCGCGCGGC TCCAGGGGGT CCGGCTTGGC CGCGAAGCGG AGGATGCATG A
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Protein sequence | MFSGIVERTV ALLERRDGRL LFDRSDWDVA IAPGSSIAFN GACLTAVEIS DEVVGVDVVP ETLRRTNLGA LEPGVLVNVE RSVTLQTLLD GGLVLGHVDA VATVTDVDDE GIVVHYPERF EPLVVEKGTI VLNGVALTVA ELAPASARVA LIPETRRRTN LGTCEVGAVL NIEFDVIGKY VARLQGVRLG REAEDA
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