Gene Afer_1417 details

Gene Information

• Locus tag: Afer_1417
• ID: 8323500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: -
• Start bp: 1481505
• End bp: 1483457
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644952549
• Product: hypothetical protein
• Protein accession: YP_003110014
• Protein GI: 256372190
• TIGRFAM ID: [TIGR02243] conserved hypothetical protein, phage tail-like region

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.677247
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGGCTGC CGACTCCCGA ACTCGACGAT CGCCGCTTTC AGGACATCGT CGACGAAGCC 
AAGCGTTTGA TCCCGCGCTA CTGTCCCGAG TGGACCAACC ACAACGTCTC CGATCCCGGG 
GTTGCGCTCA TCGAGCTGTT CGCCTGGATG AGCGAGACCG TGCTCTACCG CATCAATCAG 
GTGCCAGACC GGCTCTACAC GAAGTTCCTC GACCTCGTTG GCATCAGCCC ATTCCCACCG 
GCGCCAGCCC ATGCCGACCT GGTCTTTTGG CTCTCGACCG TTCTCGAGCA CGACGTCGTC 
GTGCCAAAGG GGACCCAGGT CGCCACCGCC CCCGTACCGG GGCAGCCGGA GGTGCTCTTC 
TCCACCATCG ACGATCTCGT CATTCGCCCC CCGACCCTGA TTGGCGCGAT GACCGCCACA 
GCCGACGGCG GTGGCCAGGT TCGCGACGTG TGGGATGACC TCCGCTTCGA GGGCGGGGTC 
GTGCGATGCT TCACCTCGGA CCCGCTTGCA CCCGGTGACG CGACGTACTT CGGATTCGAG 
GGACTCGCTC CGGGTGCCGT CATTCGCCTC AACGTGGGAG CCTCGATCGA GGGGATCGGT 
GTCGATCCGA CCGATCCGCC ACTCGCGTGG GAGGCGTTCG TCGGAGAGTC ATGGGTAGCG 
ATGCCCGTGC ATCGAGACAC AACGGGTGGG CTCAATCGCG ATGGGGAGAT CGTGCTCGTG 
TGCCCGCGCG CGCTCTCGCC CCTGACGCTC GGTGGTGTTC GCGCGACGTG GCTGCGCGTC 
CGTCTTCTCG CGGCACGCCC TGGCCAACCT CCCTATCGAG CCTCACCATC CCTGTCGTCG 
GTGACCGTGA ACGTCCTCGG CGGAACGGTG GCTGCCGAGC ACGCTGCGAC CACAGGGCCC 
GAGCGTCTTG GTCGGAGCGA TGGCTCACCC GGACAGGAGT TTCAGCTGAG TCACGCCCCG 
GTGTTGGCTC TCCGTGACGA CGAGGTGCTC ACGACGACGA CCCCAGACGG CGTGGTCTGG 
ACGTGGGAGC CGCGTGCGGA CTTTGCATCG TCGACGGGTG AGGACCGACA CTTCGTGCTC 
GATGGAGCGA CCGGAACGGT TCGCTTCGGT CCGCGCGTGC GTTACGCCGA CGGCACCGTC 
CGTCAGCACG GCGCGATCCC CCCCGACGGT GCGGCGATCA TGCTCTCGTC GTACCGCTAC 
GGGGGCGGTT CCGTCGGCAA CGTCGGCGCC GAGACGCTCA CCGTCTTGCG CAGTTCGGTG 
GCCTACATCG ATCGAGTCAC GAACCCATTC CCTGCCTCGG GCGGGGTCGA TCCCGAATCG 
GTCGCGAACG CCAAGCTTCG CGGGCCGATG ACGTTGCGCT CCGGTCAGCG GGCCGTGAGC 
GCATCGGATT TCGAGCGGCT CACGCTCGAA GCCTCGCCCG AGGTCGCACG GGTCCGCTGC 
GTGGCGCCGA ACCTCGTCGG TGATCCGGTG CGCTTGCTCG TCGTGCCGAG GGTCCGAGGG 
CGCTGCGAGG ATCACCAGCT CGACGACTTC GAACTCTCGG ACGCGCTCGT CGAGCAGGTC 
ATCGGCTACC TCGAACCGCG ACGACTGATT GGTACCACGG TCGACGTCTC CACCCCGTAC 
TATCGGGGCG CCACGGTCGC TGCACTCGTG CGGGCCATCC CCGGGCGCCC GAGTGCCATC 
GTGCGCCAGC GTGCCCTCGA TGTGCTCTAT CAATACGTCC ATCCGCTGGT CGGTGGCCCC 
GCCGGTGACG GTTGGCCGTT CGACGCAGAT TTGACCGCAG CCGGTGTGGC CGAACGACTC 
GAGACCGTCG ACGGCATCGA GGCGGTCGAG GAGGTGCTCC TGTTCGAGGC TGATCTGCGC 
ACCGGCGAGC GTCAAGGACG CGGACGGGAG GTCTTGGCGC TCGATCCGTT GTCGCTGTTC 
CTCTCGTTCC GTCACCAGGT CGTCGTCCGC TAG 

 

Protein sequence

MGLPTPELDD RRFQDIVDEA KRLIPRYCPE WTNHNVSDPG VALIELFAWM SETVLYRINQ 
VPDRLYTKFL DLVGISPFPP APAHADLVFW LSTVLEHDVV VPKGTQVATA PVPGQPEVLF 
STIDDLVIRP PTLIGAMTAT ADGGGQVRDV WDDLRFEGGV VRCFTSDPLA PGDATYFGFE 
GLAPGAVIRL NVGASIEGIG VDPTDPPLAW EAFVGESWVA MPVHRDTTGG LNRDGEIVLV 
CPRALSPLTL GGVRATWLRV RLLAARPGQP PYRASPSLSS VTVNVLGGTV AAEHAATTGP 
ERLGRSDGSP GQEFQLSHAP VLALRDDEVL TTTTPDGVVW TWEPRADFAS STGEDRHFVL 
DGATGTVRFG PRVRYADGTV RQHGAIPPDG AAIMLSSYRY GGGSVGNVGA ETLTVLRSSV 
AYIDRVTNPF PASGGVDPES VANAKLRGPM TLRSGQRAVS ASDFERLTLE ASPEVARVRC 
VAPNLVGDPV RLLVVPRVRG RCEDHQLDDF ELSDALVEQV IGYLEPRRLI GTTVDVSTPY 
YRGATVAALV RAIPGRPSAI VRQRALDVLY QYVHPLVGGP AGDGWPFDAD LTAAGVAERL 
ETVDGIEAVE EVLLFEADLR TGERQGRGRE VLALDPLSLF LSFRHQVVVR