| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1330 |
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| Symbol | |
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| ID | 8323409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1384267 |
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| End bp | 1385217 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952460 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003109929 |
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| Protein GI | 256372105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGCTG GTATCGCGGT CCCGCCTCGG ACCGCACCCG CACAACGGTC GGACGACCAT
CGTGCTCGTC GAGGCCTGGC TCGAGCAGGG TGGTGGCTGT CTGCTCCGGC GCTCGTCGTC
ATCGGCGCGG TCACGGTCTT CCCGATCGTG TTCTCCATCG TGCTCAGTCT CTCCAACGTC
AACGTGACCG GCGCGGGCTT CCAGCTCGGC GGCGCGACGG GCGCCAACTA CAGCGAGATC
GTCCACGCTG CCGTATGGCG CTACGCCCTC GAGTTCACGG TCGGCTACAC CGTGATCACG
GTCTTCGTCG AGGTCGTGCT CGGCACGCTG ATCGCACTCG TGGCGGCGCG GTTGACGAAG
GGCCGAGGGC TCTTCATGGC CCTCTTGCTC CTGCCCTGGT CGATGATCAC GGTGATCTCG
GCCGAGCTGT GGGGCTACAT CTACCAGGGG ACTTACGGCG TGGCCGACGC CTTGTTCCAG
GCGGTCGGGC TTGGCCATCC GCTGTTCCTC GGGACGCCGA CTCCTGCGAT CATCTCGATG
ATGGTGGCGG ACATCTGGAA GACGACGCCG TTCGTCGGGA TCATCGTGCT CGCGGGTCTC
GTGATGCTGC CGGAGGACGT CTTCGAGGCG GCCCAGATCG ACGGCGCTTC GGGCTGGACG
ACGTTCTGGC GCATCACCTT CCCGCTCCTG CGGCCGACGC TCGCGATCGC GACGCTGTTT
CGTATACTCC AGGCCTTCGG GCTGTTCGAC CTTCCCTTCG TGCTGACCGG CGGGGGACCT
GGGACGTCGA CGACGTCGCT CGCGCTGCTC GGCTACAAGG TGATGTTCGA GGATGTGAGT
TTCGGACCGG GTGCGGCCAT TGCGACCACG ACGACCGCGC TCGTGCTGGC TGGTTGCATC
GTGTTCCTGC GAGTCTTCCG CGCCCAAGTC GGCGCGGCGA AGGAGGCGTG A
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| Protein sequence | MVAGIAVPPR TAPAQRSDDH RARRGLARAG WWLSAPALVV IGAVTVFPIV FSIVLSLSNV
NVTGAGFQLG GATGANYSEI VHAAVWRYAL EFTVGYTVIT VFVEVVLGTL IALVAARLTK
GRGLFMALLL LPWSMITVIS AELWGYIYQG TYGVADALFQ AVGLGHPLFL GTPTPAIISM
MVADIWKTTP FVGIIVLAGL VMLPEDVFEA AQIDGASGWT TFWRITFPLL RPTLAIATLF
RILQAFGLFD LPFVLTGGGP GTSTTSLALL GYKVMFEDVS FGPGAAIATT TTALVLAGCI
VFLRVFRAQV GAAKEA
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