| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1235 |
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| Symbol | |
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| ID | 8323309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1291824 |
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| End bp | 1292660 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644952365 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_003109839 |
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| Protein GI | 256372015 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGTCG GCTGTCACGT GTCGGCCGCT GGCGGTGTGC TCAAGATGCT CGAACGCGCC
GGAGAGCGAG GCGCGAGCGT TGCGCAGTGC TTCTTGGGCT CCCCTCGATC GTGGCGGTGG
TCCGTCGGCG TGGCGCCCGA GCCTGATGTG GTGCGCGAGG CGGCGCAGCG AGCCGGCGTC
GAACGGATCG TGGTCCACGC GTCGTATCTG ATCAACCTCG CCTCCGTCGA CGCGAAGCTG
CGCGATCGAT CGCTGGCGTT GCTTCGCCAG ACCGCGATCG CTGCCGAAGG CATCGGCGCC
GAGTCGGTGG TCGTCCACGC CGGCTCCGCG CCTGGTGACG ACCCTGATGC AGCGCGCCAG
CGGATCCGGG AGGGGCTCGA GCGCGTGCTC GAGGCGACGT CGACGATTCG CATTCTCGTG
GAGAACCCGG CGACGGGTTC GGTGGCGTCC GGTCCGGCCG AGCTGGGGGC CCTGGCTGGG
GCCCTCCGGA CGAAGCGGGT GGGGGTGTGT CTCGACACCC AGCACCTGTT CGCCGTCGGC
TGGGCCATCG ACGAAGCCGC GGGGCGCGAG GAGATCGTCA CGGCGCTCCA GGCGGCACAG
GTGCCCGTGG CGCTGTGGCA CTGCAACGAT TCGGCCAGTG AGCGTGGTCG AGGGCGCGAC
CGTCACGCGA ACATCGGCGA GGGGGCGATC GGAGCCGAGG CGCTCTGCTC GCTCGTCGCC
GATCGGCGCC TGCCGGAGGC CGATGTGGTG CTCGAGGTCC CGGGAGCGGG CGACGGTCCC
CGCGCCGAGG ACGTCGCAGC GGTGCGAGCC CTCCTCGTCC GTCACGAGCG ACTATGA
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| Protein sequence | MRVGCHVSAA GGVLKMLERA GERGASVAQC FLGSPRSWRW SVGVAPEPDV VREAAQRAGV
ERIVVHASYL INLASVDAKL RDRSLALLRQ TAIAAEGIGA ESVVVHAGSA PGDDPDAARQ
RIREGLERVL EATSTIRILV ENPATGSVAS GPAELGALAG ALRTKRVGVC LDTQHLFAVG
WAIDEAAGRE EIVTALQAAQ VPVALWHCND SASERGRGRD RHANIGEGAI GAEALCSLVA
DRRLPEADVV LEVPGAGDGP RAEDVAAVRA LLVRHERL
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