| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0872 |
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| Symbol | |
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| ID | 8322936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 891937 |
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| End bp | 893514 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952006 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003109490 |
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| Protein GI | 256371666 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.419255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCGA GCGAGCAGCA GATGCACCGA ACGCTCACGC TCACCGGTGT CACGGTCAAT
GGGATGGCCT TGATCGCGCC CGGAGCGTTT CTTTGGACAA CGTTTCAGGA ACAGGCGGCC
CAGACGAACC ACGGTCAGCC GACGGGCCTT GACATGTGGA CAGGGCTCCT CTTCGCCTTC
ATCCTCGCCA TGCTGACCGC GTGGAGCTAC AGCCAGCTGG CTCGGATCTA TCCCGATGCG
GGCACGGGCT CGACCTACTA CTTCGCCGAA GCCGCCTTCC TCGACCAGAA CCACCCGCGC
TTCACCGCCA CCGCGAGAGC GGTGAAGTTC GCCTTCGGCT GGATCAGCCA CCTGTACTAC
TGGATCTATC CGGGCATCAT GGTGGCGTTC ATCGGTACCC TGATCGGCTA CATCATCGGC
GCGGTCGGAG GGGTCACGCT GTCGTGGCTC GAACTCTCGG TGATCGCCGT CGTCGCCGCC
GCGGGGATCG GCTACATCGC CTACCGTGGC ATCACGGGGT CCACGATGAC GGCGCTCGTC
ATCAACGTGA TCCAGATCGT GACCCTCGTC GCGATGACGG CTCTCTTCTT CATCGCGTTC
CGCGTCGCGC ACCCGGACGG TGGCTACGTG CAAGCGAGCG CACTCTCGGT CATCCTCCCA
CACAGCTTCG TGAACCTGCT CTACCAGTCG ACCATCGCCA TCTTGTTGCT CGTCGGCTTC
GAGTCCATCA CGGCCCTCGG CGCCGAGGCG CGCAATCCCG AGCGCGACAT CCAGCGTGGG
GTCTTGATCG CGCTCGCCAT CCAGGGAGGC TTCTCGTACC TGTTGGAGTA CTTCGGTGCG
AACTTCGCAC TCGGCTCTGC GACCATGGCA GGTCAACCGG GCGCAAACGT CTTTGCCAAG
GCCGGCAACG ATGCGGCGCC GATCGGCACG ATGGTCCAGA ACGCTGCCGA TCGCATGTTC
CATGGCGGCG GAGAGGCGGC TGCGTTGATC GTGGCCGCCA CGGTCCTCAT CGCACTCATC
GGCACGACGC TCGCGTGCAT CAACACCGCA GTTCGCGTGA GCTACTCGAT GGCCAGGGAC
CGTGAGCTGC CCAGCGTGAT CGGGTGGTTG CACGGGCGCT TCGCCACACC CCACGGCGGC
ATCCTCGTGA TCAGCGCGAT CAGCGCCGTG GTGGCGATCT ACGGGGTGCA CACGGTCGAC
AACCTGACGC AGATCACGCT GGCGTCCAAC ATCGGGACCT TTCTGGTCTA TGGCATGACG
TGTGTGATCG CGATCGTGGC GTTCTCCCGT CGCGCCGATC GTTCCCTGCT CGCTCATGTG
CTCGCCCCTG GCCTTGGGGC GCTCATGAAT CTGGCCGAGC TCGCTGGCGT GGTCTATCTC
GCCATCGCTG GCGGCGGCTC GGGTGCGACC GATGCGGTGA AGGCCATCGG TGTGGTGCTG
GCCTGGACCA TCGTTGGGCT CGTGTGGTAC TGGGCGAACC CGCACCGCCA TCATGCCAAG
AGCATCGTCG GCGAGCGCGC CACGAGGCGA CTCGGCGGGG CCGGGCGCGG CGTGTCGGCC
GCGGCGGAGA CGCCATAG
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| Protein sequence | MAASEQQMHR TLTLTGVTVN GMALIAPGAF LWTTFQEQAA QTNHGQPTGL DMWTGLLFAF
ILAMLTAWSY SQLARIYPDA GTGSTYYFAE AAFLDQNHPR FTATARAVKF AFGWISHLYY
WIYPGIMVAF IGTLIGYIIG AVGGVTLSWL ELSVIAVVAA AGIGYIAYRG ITGSTMTALV
INVIQIVTLV AMTALFFIAF RVAHPDGGYV QASALSVILP HSFVNLLYQS TIAILLLVGF
ESITALGAEA RNPERDIQRG VLIALAIQGG FSYLLEYFGA NFALGSATMA GQPGANVFAK
AGNDAAPIGT MVQNAADRMF HGGGEAAALI VAATVLIALI GTTLACINTA VRVSYSMARD
RELPSVIGWL HGRFATPHGG ILVISAISAV VAIYGVHTVD NLTQITLASN IGTFLVYGMT
CVIAIVAFSR RADRSLLAHV LAPGLGALMN LAELAGVVYL AIAGGGSGAT DAVKAIGVVL
AWTIVGLVWY WANPHRHHAK SIVGERATRR LGGAGRGVSA AAETP
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