| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0770 |
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| Symbol | |
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| ID | 8322832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 781317 |
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| End bp | 782690 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644951905 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003109391 |
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| Protein GI | 256371567 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.175551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAGA TCCAGGCGCC GCTCGCCGAG CCCTCCTCGC AGCGTCAGGG GCGCCGTAGG
GCCCAGAGTC GCCTCCCGAG GGAGCGGCGT GGCCGACCGG TCGGGCGCTA CCAGATGGCC
GTGCATGTCC ACGGGGACGT CACGCACGTC GCGATTCTCG AGGGTCGCAG CTTGATCCAG
CACGCGGTCT CTCGCGCGAG CGACACCGAG ACGAGCGTGG TGGGCAACAT CTATCTCGGA
CGGGTGGTGA ACGTGCTACC CGGCATGGAG GCCGCGTTCA TCGACATCGG CACGGCGAAG
AACGCGGTGC TCTACCGCGG CGACGTGCGC TACGAGCGCG AGGATCTCGA GGGACTCGGT
GACGGCGCCC GCATCGAGCA GCTGCTGCGT CCGAAGCAGG TGATCGTGTG CCAGGCGGTG
AAGAACCCGA TCGCGCACAA GGGCGCGCGC CTCACGCAGG AGGTGTCACT CCCGGGGCGT
TTCGCGGTGC TGGTGCCGGG TCAGCGGTCG GTGGGCATCT CGAAGCGCCT CCCAGACCAG
GAGCGACGGC GTCTGCGAGG GCTCGTCGAG GATCTCGTGC CCGAGGGTTT CGGCGTGATT
CTGCGCACTG CTGCTGAGGG CGCGACCCGA GCGGAACTCG AGCGCGACAT CACGCAGCTC
GTCGGGATGT GGCAGCGCAT CGACGAGCTG GCACGAACTG AGCACGCTCC AGCCCTGCTC
TACCAGGAGC CCCCAGCAGC GGTCCGCGTC ATCCGCGAGG AGTTCTCGCA GGAGTTCCGC
TCGGTCGCGA TCGATGACCG AGCGCTCTAC GAGGACGTCG CGCGCTACGT CCAGACGATC
TCGCCCGAGC TCGCCGACCG TGTCGAGTAC TACGACGCCG AGGCAGAGGG CGTTCCGATC
TTTCAGCGTT ACCACGTTCA GCACCAGCTC GCCAAGGCGC TCGAGCGCAC GGTCTGGTTG
CCGAGCGGCG GATCGCTCGT CATCGATCGC GCAGAAGCGC TCACCGTCAT CGACGTCAAC
ACGGCCCGCA ACGTCGGGGC GGTGTCACTG GAGGAGACGA TCCACCGCAA CAATCTCGAG
GCGGTCGAGG AGATCGCTCG GCAGCTCCGA CTCCGCGACA TCGGCGGGAT CATCGTGATC
GACGTCGTGG ACATGGTGGA CCCGCAGAAC CGTGACGACG TGATGCGGGC GTTCCGAGCA
GCCCTTGCTC GCGACAAGAC GAGAACCCAC GTCTACGACA TGAGCCCGCT GGGTCTCATC
CAGATGACCC GGCAGCGCAT CAGTGAGGGC CTCGTGGAGT CGCTCTCGTC GACGTGCCCG
ACCTGCCATG GCCAAGGCTA CGTCCTGGAC GAGGATGTGG TCGCGAGCCG CTAG
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| Protein sequence | MMEIQAPLAE PSSQRQGRRR AQSRLPRERR GRPVGRYQMA VHVHGDVTHV AILEGRSLIQ
HAVSRASDTE TSVVGNIYLG RVVNVLPGME AAFIDIGTAK NAVLYRGDVR YEREDLEGLG
DGARIEQLLR PKQVIVCQAV KNPIAHKGAR LTQEVSLPGR FAVLVPGQRS VGISKRLPDQ
ERRRLRGLVE DLVPEGFGVI LRTAAEGATR AELERDITQL VGMWQRIDEL ARTEHAPALL
YQEPPAAVRV IREEFSQEFR SVAIDDRALY EDVARYVQTI SPELADRVEY YDAEAEGVPI
FQRYHVQHQL AKALERTVWL PSGGSLVIDR AEALTVIDVN TARNVGAVSL EETIHRNNLE
AVEEIARQLR LRDIGGIIVI DVVDMVDPQN RDDVMRAFRA ALARDKTRTH VYDMSPLGLI
QMTRQRISEG LVESLSSTCP TCHGQGYVLD EDVVASR
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