| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0580 |
|---|
| Symbol | |
|---|
| ID | 8322639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 585868 |
|---|
| End bp | 586857 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644951718 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003109207 |
|---|
| Protein GI | 256371383 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.236014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCAC CGGCCCGACT GGCGCGCGTT CGCCACCACT GGCGGCTCCT GGTCGGTCTC
GTCGGGATCG CGGTCGCAGC CTGGGCACTC GCCTCCCAGC GCGCCCAGCT CTCGGGATCG
GTCGCCATCG TCCTCCACGC GAACGCCGTC CTCGGTGCCA TCGCGTTCGT CCTGGAGGCG
GCCAGCGACA CGGCGTGGGC GCTCATGACC TACGTCCTCC TCCCGAGCGG AACGCGACTC
GGGTGGGTCC GGTTCCTCGC GATCTCGCTC GCAGCCCTGT CGATCACCAA CTCGATCCCC
TTCGGCGCCG GTGTGAGCGC CGTCTGGGTG GTCGCCCAGC TCCACGACGC CGACGTCGAC
GTCCTCGCCG CCGCCTCGGT CATCGCCGCC TCCAACCTGG TCGCGATGGG TACCCTGATC
GCCCTGTTCG CACTCGCGCT CGTGGTGCAC GCACCCGCGT CCAGCGTGCT CTCGTCGCTC
GACGATGCGC TGATCGTCGC CGTCGGCATC GCCGCCGCGC TCGCCCTGTG GCAGCTCGAG
CGCCTGTCGG CCTGGGTCGC CGAGCTCCTC ACCCGTCTCG CCACCCGCGT GCGATGGCGA
CGCCTCGCCG CGAGTGCACG CCGTCTGCAG CCGCTGCGCA TCCCACCGCG CCGGCTCGGC
GCCTCCATTG GCCTCGGGGC TGGCAACTGG GCCTTCGACT TCGGCGCGCT CCTCGTCGCG
CTCGCCGCCG TCGATGCCCA CGTGTCCGTG GCGGCCGCGG CCAGTGCCTA CGTCGTCGGT
GCCCTCGCGA CGAACCTCCC CATCACGCCA GGCGGGCTCG GCGTCGTCGA GGGATCCATC
ACCGTCGCGC TCGTGGCCTT CGGAGGAGCG CCGGTGCCCA TGCTCGCAGC CGTCATCCTC
TATCGACTCG CCAGCTACTG GATCTGGCTG CCGATCGGAT GGGCGGCCTA CTTCTGGATC
GCCAGGAGGC CAACCAATGC CACGACGTGA
|
|---|
| Protein sequence | MAPPARLARV RHHWRLLVGL VGIAVAAWAL ASQRAQLSGS VAIVLHANAV LGAIAFVLEA
ASDTAWALMT YVLLPSGTRL GWVRFLAISL AALSITNSIP FGAGVSAVWV VAQLHDADVD
VLAAASVIAA SNLVAMGTLI ALFALALVVH APASSVLSSL DDALIVAVGI AAALALWQLE
RLSAWVAELL TRLATRVRWR RLAASARRLQ PLRIPPRRLG ASIGLGAGNW AFDFGALLVA
LAAVDAHVSV AAAASAYVVG ALATNLPITP GGLGVVEGSI TVALVAFGGA PVPMLAAVIL
YRLASYWIWL PIGWAAYFWI ARRPTNATT
|
|---|
| |