| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0469 |
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| Symbol | |
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| ID | 8322528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 470047 |
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| End bp | 470931 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644951620 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_003109109 |
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| Protein GI | 256371285 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCC AATCCGCTGG TCTCTCCTCG ACTCGATCCG TCGCGCGCCG CTACGGGCGC
ACGTACTACC TCGCATCCCG CCTCCTCGAG CCGGACGCGC GCCCAGGCAT CTGGGCGATC
TACGCCTTCT GTCGACGGGC CGACGACATC GTCGACGGTA GCGCCACCAC CGACGAAAAG
CGTCGCGGTC TCGACGAGCT CGAAGCGATG CTCTGCCAGG CCCTCGTACG CGGCGGCAGC
GACGACCCGG CCCTCGATGC GCTGGTGTCG ACCTACGAGC GCTGGCAGAT CGAGCCGGAG
ACGCTCGCTC GCTTCCTTGG CGCGATGCGG CGCGACCTCA CCGTCCGGCG CTACCAGCGA
TGGGACGATC TGCTCGACTA CATGGAAGGA TCCGCCGCCG TCATCGGCGA GATGGTCCTC
CCCATCCTCG GTGGCCCACC CGCTGCTCGC GAGCCCGCTC GCGCGCTCGG GCTCGCCTTC
CAGCTCACCA ACTTCATCCG CGACGTCGGC GAAGACCTCG ATCGGGGACG GATCTACCTG
CCACTCGAGG ACGTGGCGAA CCACGGGGCG CTCGACGACT TGCTCGCGCG TCGGCCCTCG
CCGGCGGTAC GAGCGCTCGT GCGCTTCGAG ATCGAACGAG CACGGACCCT CTATCGGGAC
TCACTCGCCG GTGATCCCCT CCTGCCGCGC GCCTCCCGCC GCTGCGTCGA GGTGGCACGC
GAGCTCTACA GCGCCATCAT GCTCGAGGTC GAACGCAACG ACTACGACGT TCTCACACGG
CGAGCCATCG TCCCGAAGCG ACGCCGCGCC GCCGAGGTCG TGCGGGCGCT CGTCGCACCC
CGTGCGCTGC CACGACTCCT CGCCGAGGAG GGCGCTCGAG CTTGA
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| Protein sequence | MMRQSAGLSS TRSVARRYGR TYYLASRLLE PDARPGIWAI YAFCRRADDI VDGSATTDEK
RRGLDELEAM LCQALVRGGS DDPALDALVS TYERWQIEPE TLARFLGAMR RDLTVRRYQR
WDDLLDYMEG SAAVIGEMVL PILGGPPAAR EPARALGLAF QLTNFIRDVG EDLDRGRIYL
PLEDVANHGA LDDLLARRPS PAVRALVRFE IERARTLYRD SLAGDPLLPR ASRRCVEVAR
ELYSAIMLEV ERNDYDVLTR RAIVPKRRRA AEVVRALVAP RALPRLLAEE GARA
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