| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3075 |
|---|
| Symbol | |
|---|
| ID | 3889308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 3496330 |
|---|
| End bp | 3498138 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637864624 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_466281 |
|---|
| Protein GI | 86159496 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4235] Cytochrome c biogenesis factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.320155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCT CCGAGAGAGT CGGCGCCGGG CCAGGTCCGG GCCGTCACGC ACCGTACCTC
GCGGCGCTCC TGGCGCTGGG CGCGCTCGCG TGGGCGAACG CGCTCGGCTG CGGGTTCGTG
TTCGACGACC TGCCCTCGAT CGTGCACAAC CCCGACATCC GGCGGCTCGC GGGCTACCTG
CCCGGCGGGC ACGGATACCT GGGGCGCCCG AACCGCTGGG TTGGGTACCT GACGTTCGCG
CTCAATTTCC GCGCCGGTGG GCTCGCGCCG GCGGGCTACC ACGCCGTCAA CGTCTTGATC
CACCTCGCGA CCGCGTGCCT GGTCTACGCG CTCGCGATCC TGGTCCTCCG CACGCCCAGG
GTGTCGGGCT CCCGCATCGC CCGGTCGCCG CGCGCCTTCG CGTTCGTGGC GGCAGCGCTC
TTCGCGTGCC ACCCGCTCCA GGCCCAGGCC GTCACGTACG TCGTCCAGCG GCTCACCTCG
CTGGCGACGC TGTTCTATGT CGGGAGCGCG GTCCTGTACC TGTGGGCGCG GCTCGCTCCC
GCCGGCGCGC GCGGGCGCCG CGTCGCCGCC TACGCCGGCG CGGTCGCGTC CGCCGCGCTC
GCTGCGCGGA CGAAGGAGAT CGCCGTCACG TTACCCGCCG CGCTCGCGCT CCTCGAGGTC
GCGTTCCTCG ACGGGCGTCC CGGACGGCGT GCGCTCGCGC TGGCGCCCTT CGCGCTGGTC
GCGCTGTCGA TCCCGTTGAC CATGATCGGC GTGCGAACGG TCGCCGGGGC GGGCGTCTCG
GACGTGCTCT CCGCCGCCGC GAGCGCGACC CGCGTGCAGA CGACGCTCGG CCGCCTCGAG
TACCTCGCGA CCGAGACGAC CGTGGTCCTC GAGTACGTGG GGCTGCTCCT GCTCCCGATC
GGGCAGAACG TGGATCACGT GCACCCGATC CACCGCTCGT TCCTGGACGG GCCAGTCGCG
CTGTCGAGCG CGGCGCTCCT CCTCGCCGCC GCGCTCGCGC TGTATGCGGT CGTGCGGAGG
CGCCGGGGCG ACGCGACGGC AGCCCTGGCC GGCTTCGGCG TGCTCTGGTT CCTCCTTGCG
CTCACCGTCG AGTCGAGCGT CGTCCCCATC GTCGATGTGA TGAACGAGCA CCGCGTCTAC
CTCCCGTCGG TGGGCTTCTT CCTGGCCGCG GCGGTCGCGA TCGGCTGGGT GGCGGCGCGG
CTGGCGCCCG CGCGCGCCGG CGCGGCGAGC GTCGTGGCCG GTGCGGTGCT CGCCACCGCG
CTCGCCGCCG GCACCCACGC CCGCAACCGG GTCTGGGAGA GCCAGCTCAC GCTCTGGGCC
GACGCGGCGC GAAAGTCGCC AGCGAGTCCC AGGCCGCTGA ACAACATGGG GGTTGCGCTC
GAGCAGGCCG GGCGGCGCGA CGAGGCGGAG GCGGCGTACC TTGCCGCGAT GCGCGTCGAT
CCGGGACACG CGGAGTCCTG CTACAACCTC GGGCGGCTCT ATCTCGAGTC GGGCGGCGGA
CTCGACGACG CCATCGCGCT GTTCCGGCGC GCCATCGCGC TCCGCCCCGA CTACCCCGAG
GCGTACGCGA ACCTGGGGGC CGCGCTGGTG CGGGCGCAGC GCTACGCGGA GGCGGCGCAG
GTCCTGGACG AGGCCGGGGC GAAGCTGGGC GGCAGCGCCG AAGCGGCGTT CAACCTCGGA
GTCGCGCGGG TGATGCTCGG CGACGTGGAC GGGGCGCGGC GCCAGATCGA GGCGCTGCGC
GCCGCATCTC CGGAGATGGC CCTCCGTCTC GAGACCTTCG CGCGGCCGCT GCTCGATCGC
GGCCGCTAG
|
|---|
| Protein sequence | MSASERVGAG PGPGRHAPYL AALLALGALA WANALGCGFV FDDLPSIVHN PDIRRLAGYL
PGGHGYLGRP NRWVGYLTFA LNFRAGGLAP AGYHAVNVLI HLATACLVYA LAILVLRTPR
VSGSRIARSP RAFAFVAAAL FACHPLQAQA VTYVVQRLTS LATLFYVGSA VLYLWARLAP
AGARGRRVAA YAGAVASAAL AARTKEIAVT LPAALALLEV AFLDGRPGRR ALALAPFALV
ALSIPLTMIG VRTVAGAGVS DVLSAAASAT RVQTTLGRLE YLATETTVVL EYVGLLLLPI
GQNVDHVHPI HRSFLDGPVA LSSAALLLAA ALALYAVVRR RRGDATAALA GFGVLWFLLA
LTVESSVVPI VDVMNEHRVY LPSVGFFLAA AVAIGWVAAR LAPARAGAAS VVAGAVLATA
LAAGTHARNR VWESQLTLWA DAARKSPASP RPLNNMGVAL EQAGRRDEAE AAYLAAMRVD
PGHAESCYNL GRLYLESGGG LDDAIALFRR AIALRPDYPE AYANLGAALV RAQRYAEAAQ
VLDEAGAKLG GSAEAAFNLG VARVMLGDVD GARRQIEALR AASPEMALRL ETFARPLLDR
GR
|
|---|
| |