| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0880 |
|---|
| Symbol | |
|---|
| ID | 8490865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 894454 |
|---|
| End bp | 894699 |
|---|
| Gene Length | 246 bp |
|---|
| Protein Length | 81 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646358907 |
|---|
| Product | DNA binding domain protein, excisionase family |
|---|
| Protein accession | YP_003238869 |
|---|
| Protein GI | 260892772 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0183206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTTTAC CCCCTCAAAA GCGCGTGTAT TTCGTGCGTC TGGAGGTGAG AGCCTTGGGC
GAGCTACCGG AGATGCTTAC CGTGCGGGAG GTGGCGAAGC TCCTGCGCAT ACCCGTGAGG
AGCGCCTTCC AGCACTGCAA GGACGGGAGG ATACCGTGCG TGAGGATAGG CCGCACGGTG
AGGGTGCCGA AGAAGAAGCT CTTCGAGGCG CTGGGCCTGC GGGAGGAAGA CCTCCGGCCC
TCCTGA
|
|---|
| Protein sequence | MLLPPQKRVY FVRLEVRALG ELPEMLTVRE VAKLLRIPVR SAFQHCKDGR IPCVRIGRTV
RVPKKKLFEA LGLREEDLRP S
|
|---|
| |