| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1844 |
|---|
| Symbol | |
|---|
| ID | 5160107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 2033926 |
|---|
| End bp | 2035650 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640553766 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_001234965 |
|---|
| Protein GI | 148260838 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.360564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCA TGCCATTTTA TGTTGAGACT CCCGCGCTCC AGCATGCGCT CGCGGCGCGC
GGTTATGCCG ACCCGACCGC CGTGCAGAGC GCCGTGCTGG AACCCGAGGC CGAAGGACGC
GACCTCCTGG TCTCGGCCCA GACCGGCTCG GGCAAGACGG TCGCCTACGG GCTGGCCTTC
GCCGCCACGA TCCTGGACGA GGACGTGCTG CCGCCGGCCG GCGCGCCGCT CGCGCTCATC
ATCGCGCCGA CCCGCGAGCT TGCCATCCAG GTTCATGCCG AACTCGCCTG GCTTTACGAG
CATACCGGCG CGAGCGTGGT CTCCTGCGTC GGCGGCATGG ACCCGCGGCG CGAACAGCGC
GCCCTGGCCA GCGGTTGCCA TATCGTGGTC GGCACACCGG GCCGCCTGCA GGACCATATC
GAGCGCCGGC ATCTCGATCT CGGCCGGCTC AGGGTCGTCG TGCTCGACGA GGCCGACGAG
ATGCTCGATC TCGGCTTTCG CGACGAACTC GAATTCATCC TCGGCGCGTC TCCCGCGGAC
CGCCGCACGC TGCTGTTCTC GGCCACCATC GCGCGCGAGA TTGCCGCGCT GGCGCGGCAA
TACCAGCGCG ACGCGTTGCG GATCGACACC GTCGCGCGCA ACCAGCCGCA CGCCGATATC
GAATATCGGG CGATCCGGAT CGCCGCCCAC GAGGTCGAGC ACGGGCTGGT GAACCTGCTG
CGGTTTCATG AGGGCGCCGG TTGCCTGGTG TTCTGCTCGA CCCGCGAGTC CGTGCGGCAG
CTTTACGGGC GGCTTCAGGA ACGCGGCTTC GCCGCCGTCG CCCTGTCCGG CGAGCTCAGC
CAGTCGGAAC GCAATGCCGC GCTGCAATCC CTGCGCGACG GGCGCGCCCG CGTCTGCATC
GCCACCGACG TCGCCGCGCG GGGACTCGAC CTGCCCAATC TCGACCTTGT CATCCACGCC
GACCTGCCGG CCAACAAGGC GACCCTGCTC CATCGCAGCG GCCGGACCGG ACGCGCCGGA
CGCAAGGGCC TCTGCCTGCT GATGGTGCCC GACAGAAGCC GGCGCCGGGC GGAGGTTCTG
CTTGCGTCGG CGAATATCAG GGCGATCTGG GAGGCCCCTC CGACGGCCGA GGCCATCCGC
GCCCGCGACC ATGCGCGGCT GCTGACCGAT CCGGTGCTGA CCGAGGCGCC GCTCGATGAG
GAGATCGCCC TGGCGCGTGA ACTGCTTGCG AACCGGTCGG CCGATGTTGT CGCAACGGCG
CTGATCCGCC TGTATCGCGC CCGCCTGCCG GCGCCGGAGG AGATCGCGCC GCAGCCTGAA
GTCCTCCCCC GTCCGGCGGC CCGTCGCGCC GCGGGCGCAG AGGACGGGCG GGCCATGGTA
TGGTTCCGGT GCGATGTCGG CCGCCGCAAG AAGGCCGATC CGAAATGGCT GCTGCCGGCG
ATCTGCCGGG TCGGCGGCGT CACCAAGCGC GATATCGGGG CGATCCGCAT CTTCGATCAC
GAGACGCGGT TTGAAATCGG CGCCGATGTG GCCGACGCCT TTGCCGCCGC CATCGGTGCC
GGCACCAATT CCGAGATGCG GATCGAACCG GCGGGCCACC AACCCGGCAC GGCAGCGGAG
GATTTCGGTC GCGGCAGGAA GGAAGGCCGG TTCGGGAAAT CCCCGTCCCG GATCAAAGCT
CACGCGCCGC CCCGCCGCGG CGGCAAGGCA CGGAAAGCGG GATAG
|
|---|
| Protein sequence | MSPMPFYVET PALQHALAAR GYADPTAVQS AVLEPEAEGR DLLVSAQTGS GKTVAYGLAF
AATILDEDVL PPAGAPLALI IAPTRELAIQ VHAELAWLYE HTGASVVSCV GGMDPRREQR
ALASGCHIVV GTPGRLQDHI ERRHLDLGRL RVVVLDEADE MLDLGFRDEL EFILGASPAD
RRTLLFSATI AREIAALARQ YQRDALRIDT VARNQPHADI EYRAIRIAAH EVEHGLVNLL
RFHEGAGCLV FCSTRESVRQ LYGRLQERGF AAVALSGELS QSERNAALQS LRDGRARVCI
ATDVAARGLD LPNLDLVIHA DLPANKATLL HRSGRTGRAG RKGLCLLMVP DRSRRRAEVL
LASANIRAIW EAPPTAEAIR ARDHARLLTD PVLTEAPLDE EIALARELLA NRSADVVATA
LIRLYRARLP APEEIAPQPE VLPRPAARRA AGAEDGRAMV WFRCDVGRRK KADPKWLLPA
ICRVGGVTKR DIGAIRIFDH ETRFEIGADV ADAFAAAIGA GTNSEMRIEP AGHQPGTAAE
DFGRGRKEGR FGKSPSRIKA HAPPRRGGKA RKAG
|
|---|
| |