Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_0893 |
Symbol | |
ID | 5159841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 982886 |
End bp | 984559 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640552809 |
Product | type II secretion system protein E |
Protein accession | YP_001234031 |
Protein GI | 148259904 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0853399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGATC ACGCCGCCAC GCGCCCGGAT GAGGACGGTT CAGCCATCGG CACGGCGCTG CTGCGGGCCG GGCTGGTCGA TTCCCTCGGC ATCGCGCGGG CGCGGGCGCT GGCGGCGGAA ACCGGGCTCG GCCTCGGCGC TTCACTGGTC CGCCTCGGGC TGATCGGCGA GCGCAGCCTC GCCGAGGCCG CCGCCGCCGC CCTCGGTCTC GCCCTGCTGG CGCCGGACGC CTATCCCGCC GCCCCGGTCC TGCCCACGCG GCTGCGCCCC CGCTTCCTGC GCGATGCGCG GGTGCTGCCG CTGGCCGTGG CCGAGGGCGT GCTCGACCTC GCGATGGTCG ATCCGTTCGA TGGCTTCGCC GCCGGCGCGG TGGCGGCGGC CACCGGCTGC GCGGTGCGCC GCGCCGTCGC CGTGCCGATC GACCTCGATG CCGCGCTCGA CCGGCTCTAC CCCGATCCCG GCGAGACGGC GGCGGCCGAG GCGGTGGCCG AGGAGGCGGC GCCGAGCGAG GCGGATGCCG AACGCCTGCG CGATCTCGCC AGCGAGGCGC CGGTGATCCG CCTGGTCAAC CAGCTCATCG CCCGCGCGGT CGAAACCCGC GCGTCGGACA TCCATATCGA GCCCGAGGAA GACCGCCTGC GCATCCGCTA CCGTCACGAC GGCGCGCTGG TCGAGGCGGA AACCCACCCG GCGGCGATGG CGCCGGCCAT CGTCTCGCGG GTCAAGATCA TGGCGCGGCT CGACATCGGC GAGCGCCGCC TGCCGCAGGA TGGCCGCATC CGCCTGCCGG TGCGTGGCCA CGAGGTCGAT TTCCGCGTCT CCTCGATCCC GACGATGCAT GGCGAGACCA TCGCCATCCG CGTGCTCGAC CGCAGCGCGA TGACCTTCGA GTTCGGCGCG CTCGGCCTCG ACCCCGCCAT CGTCGCCGCC TTCCGCGCCG CACTCGCGGC ACCCAACGGC ATCGTCCTCG TCACCGGCCC GACCGGCAGC GGCAAGACGA CGACGCTCTA CACCGCCCTG CTCGGCCTCG ACCGCGCCAG CCGCAAGATC GTCACCATCG AGGACCCGAT CGAATACCGC CTCGCCGGCA TCAGCCAGAG CCAGGTCAAG CCGCAGATCG GGCTCGATTT CGCCCAGCTC CTCCGCGCCA TCCTCCGGCA GGACCCGAAC GTGATCATGG TCGGCGAAAT CCGCGACCTC GAAACCGCGC AGATCGCCGC CCGCGCCGCG CTGACCGGCC ATCTCGTGCT CTCGACGCTG CACACCAATT CGGCGGTCGC GACCATGACC CGCCTGCGCG ACATGGGGCT CGAACCCTAT CTCGTCGCCT CGGTGCTGCG CGGCGTGCTC GCCCAGCGGC TGATCCGCCG GCTCTGCCCC GCCTGCCGGC GAACCGCGTC GGCAAGCCCG GCCGAGGCGG CGCAACTCGG CATCGCCGCC GGCACGCCGC TCAGCCATCC CGCCGGCTGC CCCGAATGCC GCAACACCGG CTATCGCGGC CGCATGGCGA TCGCCGAATT CCTCACTCCC ACCGCCGAGC TTGCCGCCCA TCTCGCCGCC GGCGCCGGCG AGGCGGAGCT GGCCCGCGCC GCCGACCTGC GCAGCCTGGC CGATGCCGCG CGCGATGCGG TGCTGGCCGG CGAAACCTCG CTCGCCGAAA GTCTGCTCGC ATGA
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Protein sequence | MLDHAATRPD EDGSAIGTAL LRAGLVDSLG IARARALAAE TGLGLGASLV RLGLIGERSL AEAAAAALGL ALLAPDAYPA APVLPTRLRP RFLRDARVLP LAVAEGVLDL AMVDPFDGFA AGAVAAATGC AVRRAVAVPI DLDAALDRLY PDPGETAAAE AVAEEAAPSE ADAERLRDLA SEAPVIRLVN QLIARAVETR ASDIHIEPEE DRLRIRYRHD GALVEAETHP AAMAPAIVSR VKIMARLDIG ERRLPQDGRI RLPVRGHEVD FRVSSIPTMH GETIAIRVLD RSAMTFEFGA LGLDPAIVAA FRAALAAPNG IVLVTGPTGS GKTTTLYTAL LGLDRASRKI VTIEDPIEYR LAGISQSQVK PQIGLDFAQL LRAILRQDPN VIMVGEIRDL ETAQIAARAA LTGHLVLSTL HTNSAVATMT RLRDMGLEPY LVASVLRGVL AQRLIRRLCP ACRRTASASP AEAAQLGIAA GTPLSHPAGC PECRNTGYRG RMAIAEFLTP TAELAAHLAA GAGEAELARA ADLRSLADAA RDAVLAGETS LAESLLA
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