| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4571 |
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| Symbol | |
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| ID | 4071516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5417574 |
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| End bp | 5418887 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637986611 |
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| Product | HipA-like |
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| Protein accession | YP_593645 |
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| Protein GI | 94971597 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.31649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CTAGGGTCGC CGACACTCGC CCAAGCACGT TGCTTGTGAA GCTTGGCGAC
ACCGCGGTGG GCACGATCAC ACAGCTTGGG GGCTTCGACA GAAATCTGTT TGCATTCGAC
GCGGCCTACC TTGCCGATGC GCAGCGGCCG ACGTTAAGTC TCAGTTTTCT GGATGTGGAG
GGGCAACCGA GAATCACGGA ACAACTCACG CGAAGCAAGG TCCCACCGTT TTTTTCCAAC
CTGCTACCGG AAGGGATGCT TCGTGAGTAC CTGGTCGAAC GAACGGGAAT ACCGTCGGAA
AAAGAGTTCC TACTGCTGTG GATGGTGGGG AGGGATTTAC CGGGAAATGT GATCGTCGAG
GACATGGAGG GCCGTCCATC GCCGCCTCTT TCGGAGTATC TCGGCGGCAG ACTATCGCTC
ACTGCGAACC GTCGCGCTGC CCCTCTACCC CGCTTTTCCT TAGCGGGAGT GCAAATGAAG
TTCGGCGCGG GGAAGCACCC TGGCAATCGG CTCAGTATTC CGGCGCGGGG ACTTGGCGGA
GATTGGATCG TGAAGCTACC GTCTCCACAG TACGATTCGC TGCCTGACAA CGAGTACTCG
ATGATGATGC TTGGCAAAGA CATCGGCATC GACGTGCCTG AGTTTGGGTT AGCAACTACG
AAACGTATAG AAGGAATTCC GGAGGGATTT GCGAATCTCG ATGCGAATGC CTACTACGTA
AAGCGCTTCG ATCGGACGCC CAAGTCGCGG ATTCATATCG AGGACTTCAA TCAAATCTTC
GGCCAGTTCC CCGATCAGAA ATATGGGAAG CAAAGTTACA ACGCTATCGG AAAGAACATC
TTCAGAATTC TGGGTGAAGC GGATTATCGG GAGTTTGTGC GACGGCTGGT TTTCAGCATC
CTCGTCGGCA ACATGGATAT GCACCTGAAG AATTGGTCCG TGGTGTACAA GGATGGCCGA
ACACCAAGGC TCTCTCCGGC TTACGATCTT GTCTCGACAA TTGTGTACCC TGGGATCGAC
AAGGCGTTGC CGCTCTCCTT CGCGGGCACG AAAGATGCGC AGCAGGTGGA TGAGGATTTG
CTCGTAAGCT TCGCCGCAAA AACCGAGGCC CCGCGCAACT ACGTACTCGA AACGGCGACC
GAGACGGTAC GCAGCTTCAA AGATGCGTGG TCCGCAAAAG CAAAAGACCT GCCTTTGCGA
AAAGAGTGGA GAGAGATGAT TTCGGCTCGC CTCGCGACCC TGCCAATCGC CAACCTGGGA
TCGCAGGAAA CCACCAAGAA AAGACGACGA GGAAGGCCGC GGCGCGGCGC GTGA
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| Protein sequence | MKKTRVADTR PSTLLVKLGD TAVGTITQLG GFDRNLFAFD AAYLADAQRP TLSLSFLDVE
GQPRITEQLT RSKVPPFFSN LLPEGMLREY LVERTGIPSE KEFLLLWMVG RDLPGNVIVE
DMEGRPSPPL SEYLGGRLSL TANRRAAPLP RFSLAGVQMK FGAGKHPGNR LSIPARGLGG
DWIVKLPSPQ YDSLPDNEYS MMMLGKDIGI DVPEFGLATT KRIEGIPEGF ANLDANAYYV
KRFDRTPKSR IHIEDFNQIF GQFPDQKYGK QSYNAIGKNI FRILGEADYR EFVRRLVFSI
LVGNMDMHLK NWSVVYKDGR TPRLSPAYDL VSTIVYPGID KALPLSFAGT KDAQQVDEDL
LVSFAAKTEA PRNYVLETAT ETVRSFKDAW SAKAKDLPLR KEWREMISAR LATLPIANLG
SQETTKKRRR GRPRRGA
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