| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3983 |
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| Symbol | |
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| ID | 4072456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4711117 |
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| End bp | 4714413 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637986010 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_593057 |
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| Protein GI | 94971009 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGGC GGTGCCTGAT AAAATACTCG TTTACGCCCA TGATGACAGG CTCACAAGTA
CGCCGCCGCT TTCTGGATTT CTTTATCTCC AAGGGCCACA AAGAGGTCCA CTCTTCGTCG
CTGGTGCCCG CCAACGACCC GACGTTGCTG TTCACCAACG CGGGCATGAA CCAATTCAAA
GATGTCTTTC TCGGAGTCGA GAAGCGCGAC TACAACCGCG CTACTACCTC GCAGAAGTGC
GTCCGCGCGG GCGGCAAACA TAACGACCTG GAGAATGTTG GGTTCACCAA CCGTCACCAT
ACCTTCTTCG AGATGCTCGG CAACTTCAGC TTTGGCGACT ACTTCAAGAA GGACGCGATT
GCCTACGCAT GGGAGCTGGT GACATCGCCT GACTGGTATG GGATGCAGCA GGACAAGCTC
TACGCGACGA TTTTCAAGGG CGAGAACGGC GTGCCGCGCG ACGACGAGGC CTACCAGCTC
TGGCTCGACG TGGGTGTCCC CAAAGAGCGC GTCTTCGAAA TGGGGATGAA AGACAATTTC
TGGGCGATGG GCGACACCGG CCCTTGCGGT CCGTGCTCGG AGTTGCACTA CGACATGGGC
GTAGCTTCGT CCGACAAGAA GAACCCGGAG TGTGCCGCGG GGGAATGCAA GTTCCCGTGC
GAATGCGGGC GGTATGTCGA GATCTGGAAT TTGGTGTTCA TGCAGTTCGA CCGCGATGCC
AGCGGCACAC TGAATCCACT GCCGAAGCCT TCGATTGATA CCGGCGCCGG CCTGGAGCGC
GTGACGGCGG TGATGCAGGG TGTGGTGTCG AACTACGACA CGGATTTGTT TACGCCGCTG
ATTAAGCGCG CGGCGGAACT GACCGACGTT GACGAGAAGA GAGAAGAAGC GAAAGAGTCG
CAGTCGAAGA GCGCAGCCTC GTTGCGAGTA ATCGCCGACC ACTCGCGGGC GGCAACGTTC
CTGATCAGTG ATGGCGTGAT TCCGGCCAAC GAAGGCCGCG GCTACGTGCT GCGCAAGATC
ATTAGGCGCG GGATTCGCCA CGGACGTCTG CTCGGACAGA ACAAACCGTT CCTGCACGAC
ATGGTCTATG CGGTACGCGA CCTGATGCAG GATGCGTATC CGGAGCTGAA AGAGACAGCG
GACCGGGTGG CGAAGACGGT ACTGGCAGAA GAGACACGGT TTGCGAACAC ACTGGATATT
GGGCTGAAGA AACTGGATGA AGACCTCGCC TCATTGGCAG AGACGACTCG GGAATTGGGC
CGGCTTTCGT GGGAAGAGCC AAAGCCCGTC GAATTTGCGC TTAAGGAAGT TGCTCGCCAT
GTCTTTGTGG TCGCGCAGAT GCTCAGTCCG GGTATGACTT TTGACACGCC CGGTCATGGT
TTCTTACTAA GAAGAGGTAT TTACCGGGCC TGGATGGATT TGAAGGCTGT CGGGCTCGAC
AGAGTCGTGC GACTTTCCGA GATTGCAGAG GCGCTCTCGG AGGGCGAAAC CGGACGTGTT
CAAAGTGTTG CTAAGAACCT AGCACACACT AAGCAGATCC TAGACGCAGA GCAGGAACGA
CTGCAGAGTG CCTCATCTCA ACTCGAGTTC GAATTGGACG CTATGGAAGC TGAGAAAAAG
CTCGCAGAAA ATCCTGAAAT GCTCGCTGAG CAAGTGCGAG AGGTATTCGG ACCCGCTCTC
GAAGAGAAGG TAATCAATGA GCTGCGCGGC AAACTGCAAA GCCGTCCCGT CTACTCAGGC
GACAAAGCTT TCAAGCTTTA CGACACGTTC GGCTTGCCGC TCGATTTCAT GGTAGATGCC
GCACGCGACC AAGGGATCGA ATTCGATCAG GCGGGCTTCG ACGCGGCGAT GGAATCGCAG
CGCGAAACGG CACGCGCCTC TTGGAAGGGG GGATCGAAGT TAAGCGCCAG CCCTATTTAT
AGAGAACTTG CCGAGGAGCT TGGAACGAAG CCATATCCCG GTCAACTTGC TGGCGGACAT
CCAATGATCA CTCCACAGTC GATCTTTGTC GGATACACCA GTACTGAATT CAAGGGAGCC
ACGGTGCTGG CAATCATTTC GAATGGGGCA AGTGTCGCTC AGCTAGCTCC GGGAGATGTC
GCGGAGATGG TTCTCGATTA CACGCCGTTC TATTCGGAAT CCGGCGGACA GATTGGCGAC
ACTGGCTGGC TCTACGATTC CACGGGCAAT ACGGTTGTCG CGGAAGTCGA GACGGTACAG
TCTCCGGTGC AGGGTGTTCG TGCGCACAAG GTGACGGCGC GGCAGAACAT CGCCGTCGGC
GACAAGCTGA ATGCCGTCGT CAATGCCGAC GTCCGGCGCG CGACCATGCG CAATCACACC
GGTACGCATC TGCTGCATGC CGCGTTGCGC GAGGTATTGG GCAAGCACGT GAAGCAGGCG
GGATCGCTGG TGGATCCCGC GAAGCTGCGC TTTGATTTCT CGCACTTCAC CGGAGTGGCG
GATGAAGAAC TGCAGGACAT TGAAGACATC GTCAACAAGG AAGTGCTCAA GAACGATCGC
GTGGAAGTGA TCGAGAACGT GCCGATTGAC GTCGCGGTCA ACGAGTACAA AGCGATGGCA
CTCTTCGGCG AGAAGTACGG GGACCGGGTG CGGGTAATCA AGATCGGCGA TTTTTCGACC
GAGCTTTGCG GCGGCACCCA TACGCTGGCA ACCGGTGAGA TCGGCCTGAT CAAAGTGCTT
CACGAAGGCA GCGTGTCGAG TGGCGTGCGG CGTCTTGAGG CCGTTACCGG CGAAAATTCG
GTGCGGCACT TCCGCAAAGA TCACGAACTC GAAGGCGTGG TTTCGACGAT CGTACGTCCG
TCGGAAGGCC TCAGCCCGGC GCAGGCGTTG AAGTTCGAGC TTGACCGGCG CGAAGAAGAG
ATTAAGAAGC TGCGCAAAGA ACTCGAGCAG TCGAGGATGA AGTCGGCTTC GAGTGCGGTG
TCGTCGGCAA CGGAGAGCGC TCGCGAGGTA AAAGGCATCA AGGTGTTGGC CACGCGGGCT
GACAACATTG ACCGCAACCA GATGCGCACG CTAATCGATA ACCTGCGAAG CAAGCTTGGT
TCCGGTGTGA TTGTGTTGGG GTCAGTGCAG GATGGCAAGG TTGCGCTGAT CGTGGGTGTG
ACCAAGGACC TGACGTCGAA GATCCAGGCC GGCAAGATCA TCGCGCAGGT AGCAAAGCAC
GTTGGTGGCT CTGGGGGCGG GCGTCCGGAC ATGGCGGAAG CGGGCGGAAA AGACCCGGCG
GCGCTGGACG GTGCCTTAAA TGCCACCTAT GGCATTGTGG ACAGCTTGCT TTCGTAG
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| Protein sequence | MTGRCLIKYS FTPMMTGSQV RRRFLDFFIS KGHKEVHSSS LVPANDPTLL FTNAGMNQFK
DVFLGVEKRD YNRATTSQKC VRAGGKHNDL ENVGFTNRHH TFFEMLGNFS FGDYFKKDAI
AYAWELVTSP DWYGMQQDKL YATIFKGENG VPRDDEAYQL WLDVGVPKER VFEMGMKDNF
WAMGDTGPCG PCSELHYDMG VASSDKKNPE CAAGECKFPC ECGRYVEIWN LVFMQFDRDA
SGTLNPLPKP SIDTGAGLER VTAVMQGVVS NYDTDLFTPL IKRAAELTDV DEKREEAKES
QSKSAASLRV IADHSRAATF LISDGVIPAN EGRGYVLRKI IRRGIRHGRL LGQNKPFLHD
MVYAVRDLMQ DAYPELKETA DRVAKTVLAE ETRFANTLDI GLKKLDEDLA SLAETTRELG
RLSWEEPKPV EFALKEVARH VFVVAQMLSP GMTFDTPGHG FLLRRGIYRA WMDLKAVGLD
RVVRLSEIAE ALSEGETGRV QSVAKNLAHT KQILDAEQER LQSASSQLEF ELDAMEAEKK
LAENPEMLAE QVREVFGPAL EEKVINELRG KLQSRPVYSG DKAFKLYDTF GLPLDFMVDA
ARDQGIEFDQ AGFDAAMESQ RETARASWKG GSKLSASPIY RELAEELGTK PYPGQLAGGH
PMITPQSIFV GYTSTEFKGA TVLAIISNGA SVAQLAPGDV AEMVLDYTPF YSESGGQIGD
TGWLYDSTGN TVVAEVETVQ SPVQGVRAHK VTARQNIAVG DKLNAVVNAD VRRATMRNHT
GTHLLHAALR EVLGKHVKQA GSLVDPAKLR FDFSHFTGVA DEELQDIEDI VNKEVLKNDR
VEVIENVPID VAVNEYKAMA LFGEKYGDRV RVIKIGDFST ELCGGTHTLA TGEIGLIKVL
HEGSVSSGVR RLEAVTGENS VRHFRKDHEL EGVVSTIVRP SEGLSPAQAL KFELDRREEE
IKKLRKELEQ SRMKSASSAV SSATESAREV KGIKVLATRA DNIDRNQMRT LIDNLRSKLG
SGVIVLGSVQ DGKVALIVGV TKDLTSKIQA GKIIAQVAKH VGGSGGGRPD MAEAGGKDPA
ALDGALNATY GIVDSLLS
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