| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3836 |
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| Symbol | |
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| ID | 4071120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4537487 |
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| End bp | 4540717 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637985859 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_592910 |
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| Protein GI | 94970862 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
[COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.687735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT TCAGGATATT GCTACCGGCC TTCTTCTTGG CGACCACGTG GGTCAGCGCG
CAGGCTCCCT CCGATCTCGC ACAGCGCGTT GAAGAGATCA TGACGCGCCC GGAGTTTGCG
CATGCCACAT TTGGCATGCA GTTCTATTCA CTGAAGAGCG GCAAAGTGGT TTATGAACTG
AACGCTCAGA AGCTCATGGT GCCGGGCTCG ACCACGAAGC TGTTTACCGA GGGCACAGCA
CTCGAGACGC TCGGTGCGGA CTATCGCTTC CATACGCGGA TTTACCACAC CGGCACGCTC
AAATCGAATG GCACGCTCGA GGGCGACATC GTGCTGGTCG CGAGTGGCGA TCCCAACTTG
TCTGGACGCA TTCAACCAGA TGGAACGCTC GGTTTCGAAA ATGAAGACCA CAGTTATGGC
GGCGTCGATA GCCGTGGCGT CGGCTCGGAT CCGCTGCTGG TGATCCGCGA ATTTGCGCAG
CAGATTGCGA GCAAAGGCGT GAAGCGCGTG AAGGGCCGGG TGCTGATTGA CGCGCGGCTG
TTTCCGCAGG GGACGCGCGA ACTGGGCACC GGCGTTGTGA TGTCTCCGAT CGTTGTGAAC
GACAACCTGA TTGATGTGAT CGCCACTCCT GGAGCGACCG AAGGCGCACC CGCGCAACTG
AAAATTGCGC CAGAAACTTC CTATGTGCGG TTCGTGAACA AGGTCACGAC GGGCAAGACC
GGTTCCAAAC TCGAGTTCGA TTACTCCGAT CCGCAGCCTG GGCCGAATGG TTCGCAAGTC
GTCACGGCAA CGGGGAGCCT GCCATTGGGC AAACCGGTAG GGATGGTTTC GTATCCGGTG
CCGGATCCCG CGCGTTACGC CCAAGTGGTT CTGAGCGAGG CACTCCGCTC GCAGAAGATC
GAAGTAGAAA TTCCTGCCAA CAATGATGCC GATTTCAAAG CGCTCGAACC GTCTTACAAG
CCAGAGAACC TACTTGCCGA ACACGTGTCG CCTCCGCTGA GTGAAGAAGT GAAGATCACG
CTGAAGGTCA GCCAGAATCT GCACGCGAGC ATGACGCCGT ATCTGCTTGG CGCACTCGCT
GGTCACGCCA CCAAGGACAT CGATCAAGCT GGCTTTGATG TTGAGCACGA TTTTCTGTCG
AAGGTCGGGC TCGACCTTAC CGCGGCCTCG CAGAGCGATG GCGCTGGCGG AAACGCATTT
TTCACGCCTG ACTTCGTCGT GAAGTATCTC GTCCATATGG CAAGCAGCAA AGATGCCGCG
CTGTTCCGGC GCGGGTTGCC GATTCTTGGC CGCGACGGGA CCCTCGCGAA GATTGAAACT
GATTCTCCCG CAGCCGGACA CGTTTTCGCG AAGACCGGCA CGTACTTCGT ATCGGATGCG
CTGAACAAGA ATCTTCTGGT CACTGGTAAA GGGCTCGCCG GCTACATGGA AACCAGTGGC
GGCGATGAAC TAGCGTTTGC GATTTACGCG AACAACGTTT CTGTGCCGAT GGATTCCGAG
CAGGCACAGA AGATCGTAGG TGGCGCGCTG GGCGAGATCG CATCCGCTGC ATACGCCTCC
GCTGGAAGCG GGGCGCAAGC TGCGTCCTCT GGTGCATCCG CTGAGTACGA CGTTCTGATT
CGTGGCGGGC ATGTGATCGA TGGCAGCGGC AACCCATGGA TCGCTCAAGA CGTGGCGATC
AAAGGCGACC GCATCGTCGC TCTCGGGAAA CTTGGAAACG CGACGGCAAA GCGCACGATC
GATGCGACCG GCCTCGTCGT GGCACCGGGA TTCATCGACA TGCTGGGGCA GTCGGAGTTT
CAACTCGTCA TCGACAATCG CTCTTTCAGC AAACTCTCAC AGGGCATCAC GACTGAGATC
ACGGGCGAAG GACAATCCAT CGCCCCGCAG AATGAACGTA CGCTGGCGCC ACTGAAACCG
TTGGAAGATC AACTTCATTT CAAAATCGAT TGGACCGACC TGGACGGGTA CTTCGCTCAC
CTGGAGAAAT CCGGCACGCC GATCAATATC GGCACATACG TTGGCGCGGC ACAGGTGCGC
GAGGCAGTGA TTGGAGAAGA TGACCGCGTT CCGACTGCGC AGGAATTGGA AGCAATGAAG
CAGTTGGTAG CGACCGCAAT GCAGCAAGGC GCATTCGGTA TGTCGACGGC GCTGATTTAC
CCTCCCGGCC ACTACGCCAA GACCGACGAA CTGATCGAAC TGTCGAAGGT GGTGTCGCAG
TATGGCGGTA TCTACGCATC GCACATGCGC AGTGAAGGCA GCTCCGAAAT CAAAGCGATC
GAGGAAGCTC TGCGCATCGG ACGCGAAGCC AATGTGCCGG TCGAAATCTT CCATTTGAAA
GTGGTCGGCG CACCGCGCTG GGGCACCATG CCAAAGATCG TGGACATGAT CCAGACCGCA
CGCGACGCGG GTCAGGATGT GCGCGCGGAT ATGTATCCCT ACGTCGCCGG AGGCACGGCA
CTCGCCTCAG CGCTGCCGCC TTGGGTTGCG GATGGAGGAA TGCAAAAGCT GCTCGAGCGC
CTGCATGACC CTGCGGTGCG TGCGCGCATC ACTCGAGAGA TTGAAGCCGG TGATCATCCC
GATTGGGAGA ATCTGTATTT CGACAGCGGC GGCGCCAAGG GCGTACTCGT CACGGGAATC
ACGAACAAAG ACCTGAAAGA CATCGACGGA AAAACGATCG CGCAGATCGC AGGGATCCAG
AAGAAGAAAC CACTCGATGC GCTGATGGAT CTCGTGATCG CCGACAAGGC GCAAACGGGG
GCACTCTACT TCATCGCCAA CGAAAAAGAT CTTCAATACG GACTCAAGCA GCCATGGACG
AGCATTGGTC TGGATGCGGG CGAACTTTCA CTCGACGGTC CCCTGTTTGA TCCGCATCAG
CATCCGCGCG CATTCGGTTC GATGCCGCGC TTCCTCGGTC ATTACGTTCG CGACCTTCAC
CTTATGAGCA TGGAGCAAGC GATTCGAAAG ATTACCTCGA TGCCGGCGCA GCGTGAAGGA
TTGCATTATC GCGGACTGAT CAAAGAAGGC TTCTTCGCGG ATGTCACGAT CTTCGATCCA
GCGACCATCC TCGACAAAGC TACCTATGAA GACTCAGTGA AACCGTCGGT GGGAGTGAAG
TACGTTCTCG TCAACGGCCA ACTCGAGTTC GCAGATGGAA AGGTGACCGG AGTGATTGCA
GGCAAACCGC TTCGTGGCCC AGGTTGGAAG CCTGAACCAA ACGCGAAGTA G
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| Protein sequence | MKRFRILLPA FFLATTWVSA QAPSDLAQRV EEIMTRPEFA HATFGMQFYS LKSGKVVYEL
NAQKLMVPGS TTKLFTEGTA LETLGADYRF HTRIYHTGTL KSNGTLEGDI VLVASGDPNL
SGRIQPDGTL GFENEDHSYG GVDSRGVGSD PLLVIREFAQ QIASKGVKRV KGRVLIDARL
FPQGTRELGT GVVMSPIVVN DNLIDVIATP GATEGAPAQL KIAPETSYVR FVNKVTTGKT
GSKLEFDYSD PQPGPNGSQV VTATGSLPLG KPVGMVSYPV PDPARYAQVV LSEALRSQKI
EVEIPANNDA DFKALEPSYK PENLLAEHVS PPLSEEVKIT LKVSQNLHAS MTPYLLGALA
GHATKDIDQA GFDVEHDFLS KVGLDLTAAS QSDGAGGNAF FTPDFVVKYL VHMASSKDAA
LFRRGLPILG RDGTLAKIET DSPAAGHVFA KTGTYFVSDA LNKNLLVTGK GLAGYMETSG
GDELAFAIYA NNVSVPMDSE QAQKIVGGAL GEIASAAYAS AGSGAQAASS GASAEYDVLI
RGGHVIDGSG NPWIAQDVAI KGDRIVALGK LGNATAKRTI DATGLVVAPG FIDMLGQSEF
QLVIDNRSFS KLSQGITTEI TGEGQSIAPQ NERTLAPLKP LEDQLHFKID WTDLDGYFAH
LEKSGTPINI GTYVGAAQVR EAVIGEDDRV PTAQELEAMK QLVATAMQQG AFGMSTALIY
PPGHYAKTDE LIELSKVVSQ YGGIYASHMR SEGSSEIKAI EEALRIGREA NVPVEIFHLK
VVGAPRWGTM PKIVDMIQTA RDAGQDVRAD MYPYVAGGTA LASALPPWVA DGGMQKLLER
LHDPAVRARI TREIEAGDHP DWENLYFDSG GAKGVLVTGI TNKDLKDIDG KTIAQIAGIQ
KKKPLDALMD LVIADKAQTG ALYFIANEKD LQYGLKQPWT SIGLDAGELS LDGPLFDPHQ
HPRAFGSMPR FLGHYVRDLH LMSMEQAIRK ITSMPAQREG LHYRGLIKEG FFADVTIFDP
ATILDKATYE DSVKPSVGVK YVLVNGQLEF ADGKVTGVIA GKPLRGPGWK PEPNAK
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