Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3762 |
Symbol | |
ID | 4069337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 4446015 |
End bp | 4447154 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985784 |
Product | phage integrase |
Protein accession | YP_592836 |
Protein GI | 94970788 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.288729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATAT CTCCCGTTGT CACGATCTTT GTCAGGCACT CCGCAGATTG CAAATATCAC GGGGAAGAGT TTGAGAAGCG CTGCCGTTGC CGCAAGCACC TCCGATGGAG CCAGAACGGA AAGCAGTACC GACGCAAGGC CGGGACGCGC TCGTGGGGAG AGGCAGAGAA CGTAAAGCGG GAGTTGGAGG CCCAACTCTC CGGGCGAGTC ACCGAGACGC CCGCCGCGCC CGAGCAACGG TTACTACCAG AGGCCACGGA ACTTTTTCTC AAGGACAAGA AAGTTCAAGG CGTGTCCAAG GGTGTGCTCG GCAAATACAC CCGAGAACTG GATCGGCTCC GGACCCACTG CGAACGAGCG GGCGTCTACA CTGCGCAAGG AATCACCCGC GAGTTGCTCA CCGAGTTTGC AGCGACGTGG GAGAGTGTGT ACCCGAGCAG TTCCACCCGT TCCAAGGTTC GCGAGCGCTG CCGCGCCTTC CTCCGTTACT GCTACGAGTG TCAGTGGATT CCGCGTATCC CGGCACTGCC CAAGATTCAA GTAGATGAGC CGGAGACGAT GCCCCTCACG GATGCGGAAT TTAAGCGGCT GCTTGACGCG ACGTATGCGG AAGTTTCGGA CACGGACCAG CGGGCAAGGG TTCACGCGCT CTTTCAACTC ATGCGCTGGA GCGGTCTAGC GATTGGAGAC GCACTCCGGC TGGAGCGCTC GAGAGTCATC CACGACGAAG GGAAGGGTGT GCACCGCGTT GTCACCGCTC GGCAGAAAAC CGGAACGCCC GTGTCCGTGC CGATCCCGCC CGACGTTGCG GAGGAAGTGC TCAAGGTGCT GAACGGAAAT CCTCGCTACG TGTTTTGGAG TGGAAAGGGC GAGCCCGAGA GCATCTCGAA AAATTGGTCC AAGTACTACG TTCGCCCGTG CTTCGAGGGA GCGAAGATCG AGAGCAACGG GAACATGATG TCCCATCGCC TCCGAGACAC ATTCGCGTGT GACCTCTTGC AGAAGGGTGT GCCGTTGGAG GAAGTGTCCA AGCTGCTCGG GCACGAGAGC ATCAAGACCA CAGAGAGAAG CTATGCGAAA TGGATTCAGG CGCGTCAGGA CCGGCTCGAC ACGCTCGTGA TGACGACGTG GGCCAAGTAG
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Protein sequence | MTISPVVTIF VRHSADCKYH GEEFEKRCRC RKHLRWSQNG KQYRRKAGTR SWGEAENVKR ELEAQLSGRV TETPAAPEQR LLPEATELFL KDKKVQGVSK GVLGKYTREL DRLRTHCERA GVYTAQGITR ELLTEFAATW ESVYPSSSTR SKVRERCRAF LRYCYECQWI PRIPALPKIQ VDEPETMPLT DAEFKRLLDA TYAEVSDTDQ RARVHALFQL MRWSGLAIGD ALRLERSRVI HDEGKGVHRV VTARQKTGTP VSVPIPPDVA EEVLKVLNGN PRYVFWSGKG EPESISKNWS KYYVRPCFEG AKIESNGNMM SHRLRDTFAC DLLQKGVPLE EVSKLLGHES IKTTERSYAK WIQARQDRLD TLVMTTWAK
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