Gene Acid345_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2917 
Symbol 
ID4070841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3465359 
End bp3466453 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content61% 
IMG OID637984936 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_591992 
Protein GI94969944 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA AAATTGCTGT GCTTGGAGGC GACGGCGTCG GCCCAGAGGT TACGGCCGAG 
GCTGTTCGTG TCCTGCGTGC CATCGCTAAC GTCAACGGAT ACGAGTTCCA GTTCACCGAG
GCTGAAGTTG GCGGCGTCGC CATCCGGAAA CACGGCAGCC CTCTCCCGGA AAAGACGCTC
CACACCTGCC TCGAGTCCGA TGCTGTCCTA CTCGGCGCAG TCGGCCATCC CGAGTTCGAC
TCGATGCCAC GCGACAAGAA GCCCGAGACC GGCCTTCTCG CGTTGCGCCA GGCGCTCGGC
GGCTTCGCGA ACCTGCGCCC GGTGCAAGCG TATGCCGCTC TATCCGACTC GTCGCCCATC
AAGCAGGAAC TCGTCTTCGG CGCGGATGTC ATGATCGTTC GCGAACTCCT CGGCGGCCTC
TACTTCGGCG AGCCCCGCGG AATTAAAGAT GACACTGCGA CGAACACCAT GTCGTACTCG
CGCTATGAAA TCGAGCGCGT CGCACATATC GCCTTCCAGC AAGCGCGCAA TCGCCGTAAG
AAGGTGACGT CGGTTGATAA AGCCAACGTT CTCGAATGCT CGCAGCTCTG GCGCTTAGTG
GTGACCGAAG TCGCGAAGCA ATATTCCGAC GTAAAGCTCG AACACGCCTA CGTGGACTCC
TTCGCGATGC GCCTCATCCA GGCGCCCACC GCCTTCGACG TCGTACTTAC CGAAAATCTC
TTTGGCGATA TCCTCAGCGA TGAAGCTGCC GTCATCGGCG GCTCGCTCGG ATTGCTTGCC
TCTGCCACCA TCGGCGGCGA GGTCGATCTT TACGAACCGG TCCATGGCTC CGCACCCGAC
ATCGCAGGCA AGGGAATAGC CAACCCGGTC GGCGCGATCA ACTCAGTCGC CATGCTGCTG
CGCCACACCG CGAAACTTGA GCAGGATGCG CGATTGATCG AATCCGCCGT GAACGCGGTT
CTCCTCGACG GCTATCGAAC GAAGGATCTT GTTCCCTCCG CGCGCAAGTT CAATACGACC
GCGGAAGTGG GCTCCGCCAT CGAGCGCCAG TGCGCCGACA TGGCAATCAG CCATTACGCC
TACCACGCGG TATAA
 
Protein sequence
MKLKIAVLGG DGVGPEVTAE AVRVLRAIAN VNGYEFQFTE AEVGGVAIRK HGSPLPEKTL 
HTCLESDAVL LGAVGHPEFD SMPRDKKPET GLLALRQALG GFANLRPVQA YAALSDSSPI
KQELVFGADV MIVRELLGGL YFGEPRGIKD DTATNTMSYS RYEIERVAHI AFQQARNRRK
KVTSVDKANV LECSQLWRLV VTEVAKQYSD VKLEHAYVDS FAMRLIQAPT AFDVVLTENL
FGDILSDEAA VIGGSLGLLA SATIGGEVDL YEPVHGSAPD IAGKGIANPV GAINSVAMLL
RHTAKLEQDA RLIESAVNAV LLDGYRTKDL VPSARKFNTT AEVGSAIERQ CADMAISHYA
YHAV