Gene Acid345_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2202 
Symbol 
ID4069092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2623653 
End bp2624708 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content61% 
IMG OID637984218 
Productglycosyl hydrolase 
Protein accessionYP_591277 
Protein GI94969229 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.120875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.984431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTC GGAAAACAAC CAGCGCTTGC CTGCTGCTCC TCGCTTCGGT CGCTTCAGCC 
CAATGGCAGA TGCAGGAGTC GCATAGCAAC GCTGGTCTGC GCGGCATCCA CGCCGTGAAT
TCGACGATCG CGTGGGCTAG CGGCACCAAC GGTACGGTCT TGCGCACCAC AGACGGCGGC
ACGCACTGGC AGAAATGCGC CGTGCCACCC GACGCCGACA AGCTCGATTT CCGCGCGGTA
TGGGCATGGG ATGACCAGAA CGCTTACGCA ATGTCAGCCG GGCCGGGTGA GTTATCGCGT
GTCTACGCCA CGTCGGACGG CTGCACGCAT TGGTTTGAAA TCGGACGTAA CAAGGATCCC
AAAGGCTTCT GGGATGCCAT GGTCTTCGCC GCTGACGGAA AGCTGCGGAA CGGGGTGGAC
CGCACTGGCG TTCTGATGGG CGATCCAGTG GAAGGGAAAT TCTATGTCGC CAAACAGAAG
TTCGGTCGCG GCTTTCGCAT GGCGGACGAC TTCTCCTGCT CGCCGAATCC CGACGAATCG
GCGTTCGCGG CGAGCAATTC TTCGGTGGCC GTACTTCCCT TGCAAATCAT GGTTGGAACC
GGTGGCAAGA GCGGCCCGAG AGTGCTGATT TCCGTGCCGA TGATGAGCAA AGATACGTGC
ACCGCGTATC CGGTTCCGCT TGCGAGCGGC GCAGATTCTA CCGGAATCTT TTCGCTGATA
TTCCGCACGG CACAGATTGG AATCGCAGTC GGTGGCGATT ACCAGAAGCC TGATGCGACC
GCCGGTACCG CAGCCTGGAG CAACGACGGC GGCCATCATT GGACGGCCGC AACCACGCCA
CCACACGGCT ATCGCTCCGC CGTCGCATGG GACGAGGCTA AAGGCGTCTG GATCGCCGCC
GGCACCAACG GTTCCGACCA ATCGCGCGAC GATGGTAAGA CCTGGGAACC GCTGGATAAA
GGGAACTGGA ACGCGTTGTC GCTTCCCTTC GCAGTCGGAC CTAACGGACG GATTGGCAAG
TTCGCAGATG TGAAGCCAAC TACTTCGTCG CGATGA
 
Protein sequence
MRPRKTTSAC LLLLASVASA QWQMQESHSN AGLRGIHAVN STIAWASGTN GTVLRTTDGG 
THWQKCAVPP DADKLDFRAV WAWDDQNAYA MSAGPGELSR VYATSDGCTH WFEIGRNKDP
KGFWDAMVFA ADGKLRNGVD RTGVLMGDPV EGKFYVAKQK FGRGFRMADD FSCSPNPDES
AFAASNSSVA VLPLQIMVGT GGKSGPRVLI SVPMMSKDTC TAYPVPLASG ADSTGIFSLI
FRTAQIGIAV GGDYQKPDAT AGTAAWSNDG GHHWTAATTP PHGYRSAVAW DEAKGVWIAA
GTNGSDQSRD DGKTWEPLDK GNWNALSLPF AVGPNGRIGK FADVKPTTSS R