Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1908 |
Symbol | |
ID | 4069386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2290109 |
End bp | 2293015 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637983919 |
Product | fibronectin, type III |
Protein accession | YP_590983 |
Protein GI | 94968935 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0431753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGAC ATCATGCAGT TGTTTTCATA CTTCTCTTAA CCCTGGTCAG TTCGTTAGCA GCAGTCACAT CGGGTACACC GGCCACCATC ACCAGCCCAA CTCCGGGCAC AAAACTTTCG AGTACGAGTG CCACGTTCCA GTGGACGACC GGCACGAATG TCACGAGCTA CTCGTTGTAT GTCGGTACGA CGCGCGGCGC CCACGACATT TACTTCATCA ACACAGGTAC GGGTTTGAGT GCTTCGGTCA ACAATCTTCC AGCAAATGGC GGGACGTTCT ACGTCGTGTT GAACTCGCTG ATCGGCGCGG CGTGGCAACA GGTTTCGTAC ACATACATTG CGATGGGCAG TGGCACGGCG GCTTCAATTA CGGGGCCGAT TTTGGGAGCG AAGCTGACGA CCGGTACGCA GTTGTTCCAG TGGAGCGGCG GCGCAGGGAT CTCACAGTAC TCGCTGTATA TCGGGAACAC GCGTGGGGCG CACGATATTG CGTTCATTAA TGCAGGGACG TCAAGCTCGT ACGACGTGAC TGGACTTCCG ACGGATGGGC GGACGTTCTA TGTGACGCTG TACAGCCTGA ACGGAAGCAC GTGGCTCGCG AAGAGCTACA GCTACGTCGC CTCGGGAAAT GGTGTGGCGG CTGCGATGAC GAGCCCCGCG ACGGGTGCGA AGTTGGCGAG CGGCACGCAG TTGTTCCAGT GGAGCGGCGG CGTAGGCATT TCGCAATACT CGCTGTACAT CGGTACAGTG CGCGGCGGCC ACGACATTGC GTTCGTCAAC GCGGGGATAG CCAGTTCGTA CAACGTGACA GGCCTACCGA CGAATGGCGA GACGTTTTAC GTCACGCTAT ACAGCTTGAA CGGGAACACG TGGTTGGCGA AGAGCTATAC GTACTACTCG AGTGGCGCTG GAACGGCTGC GTATATCACC TCGCCCTCGC CGGGATCGCA GTTCAGCGGG ACGAGCGCGA CCTTCTCATG GATGGGAGGA GCGGGAATCT CGCAATACAG TTTGTATGTG GGAACGACAG CTGGCGCGCA CGATATCGCG TTCGTGAATG CAGGATTGAG CACGTCGGCT AACGTGACTG GACTGCCGAA CGGCGGCCAG ACGATCTACG TGACGCTGAG CTCGCTGAAT GGGAACACGT GGCTCAGCAA CAAGTACACC TATCAAGCCA GTGGCATAAC GCTGCAGTTC AACACGAGTA CGAAAGACAT TGCCAGCGGA CTCATCAACT ACGCGTACGC GACGTACTTC GATGTGAGCG GCGGCAGTCA TCCGTACACG TTTGCGATTG CATCAGGCAG TGCGCCGACA GGCGTGGTGT TCTCGGGGAC AGCTCCAGGG ATGCTGGCGG GAACTCCCAC TGCCTCCGGA AACTTCACAT TCACAGTGAA GGTAACGGAT AGCAATAACA ACTCGATTAC CAGCCCGAGC TTCACGATTC CAATCAGCGC TGGACCGAAC GGCGCGCATA ACTCCTACGT AAATGGACGC TACATCTGCA CGTATGAGGG ATACGTGGAT AGTGACACCT CGCGGATCGC AACACTGATG AGCCTCGCGA TTGACGGCGC GGGGCATGTT ACGAGCGGCG TTTATGACTC GAATGGTCGG AGCACAGGGC TGCTCAATGG AAGCGTGAGC GGGAGCTATA ACCTTGGCGG CGACAACAAC GGGACGATCA CGCTTTCGAT CGGAAGCAAG ACGCTGAAGT TCGGGATGAT GGGGAACAAT GTCGGTGGCA GCAGCGTGAG CCAATTCGAC ATCGCACAAA TTGACGATGT TGGATCTGCA GCTCCCGGCC AGCATGGCGG CGGAGTGTGC AGCAAAGCGA CGACTTCGGC ATTCTCTAAC ACCACGATGG ATGGAAAGAG CTTCGCGTTC ACACAGCACG GGGAAAACGG AAATGGGATC CCGCGCGCTC TCGCCGGAAG GTTTACGCTG ACCGCAAGCG GTTCGAACCT GACGATCACC GGAGGGCAGG CCGACCAAGC GGATGGATCG TCTACTTTGA GGGCGATTCT GTTTGGAGGC AGCTACACCG AACCCGGTTC CACGGGCCGG TTCACAATCA CTGTCAATCA GACTTCTCCG ACGACGGACA CCAGCTACGC AGTTGGCTAT GTGATCGATG CAAATCACAT GGCATTTTTG AATGCTGACA GCGGGAAGGC GCAAGTTGGG GAGATGTACA AACAGCAGCA GGCGTCGTAT TCGGCGGCGA ACCTGAATTC GAGTTTCGTG ATGCGCGACC TGGAATGGGC ACTCGACGGG AGCGGCGGGC TGCAATGGAA CAGGGCGCAG ATCATGCAAG GAACAGGTGC CGGCGGTTCA GGCAGCACCG CCAGCATTAC CATCAACCAG AGCTTCACCA ACGACGCAGA TTCGACGGGG AGCGAGTACA AGGTCGGAGA CTCGAACGGA ACCGCGACAT TCACGGTTAG CTCGAATGGC AGAATGGCGA TGAATGACGC GAATCAGGTG ACCGTCGCGT ACTTGTACGA CAACAATTCT GCATTCGGAG TTAGTGGGGG ACAGAATGTC GGGTCGGGGC TGTATGGAGT CGCGTTCAAT TACATTGAAC CGCAAATGGC GACAACACCG GGGTCGGGAT CGTATCTCAG CACAGTCGTG CCCCGGATTG AGCCTGAAGG GAACATCAAC GTCGACCTGG TGACGCTGGG CAGCGGCACG ATTGCGGGTA TCGGTGATGG CGGAGCCGCG GGGGGCATGG ATTACGCGAG CCCGTTCAGC GGGACCTTCA CGACGAGCTC GTATGGTGCG TTCTACATAT CTTCGGGTGG CGAGCAAGTC ACTAGCTGTT TTGTGGTGAG TTCGACGCGC GTGGTTTGCA TTGACGATAC GACCAGGAAC CCATCGGTAT CAGTGAGCGT GAAGTAG
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Protein sequence | MRRHHAVVFI LLLTLVSSLA AVTSGTPATI TSPTPGTKLS STSATFQWTT GTNVTSYSLY VGTTRGAHDI YFINTGTGLS ASVNNLPANG GTFYVVLNSL IGAAWQQVSY TYIAMGSGTA ASITGPILGA KLTTGTQLFQ WSGGAGISQY SLYIGNTRGA HDIAFINAGT SSSYDVTGLP TDGRTFYVTL YSLNGSTWLA KSYSYVASGN GVAAAMTSPA TGAKLASGTQ LFQWSGGVGI SQYSLYIGTV RGGHDIAFVN AGIASSYNVT GLPTNGETFY VTLYSLNGNT WLAKSYTYYS SGAGTAAYIT SPSPGSQFSG TSATFSWMGG AGISQYSLYV GTTAGAHDIA FVNAGLSTSA NVTGLPNGGQ TIYVTLSSLN GNTWLSNKYT YQASGITLQF NTSTKDIASG LINYAYATYF DVSGGSHPYT FAIASGSAPT GVVFSGTAPG MLAGTPTASG NFTFTVKVTD SNNNSITSPS FTIPISAGPN GAHNSYVNGR YICTYEGYVD SDTSRIATLM SLAIDGAGHV TSGVYDSNGR STGLLNGSVS GSYNLGGDNN GTITLSIGSK TLKFGMMGNN VGGSSVSQFD IAQIDDVGSA APGQHGGGVC SKATTSAFSN TTMDGKSFAF TQHGENGNGI PRALAGRFTL TASGSNLTIT GGQADQADGS STLRAILFGG SYTEPGSTGR FTITVNQTSP TTDTSYAVGY VIDANHMAFL NADSGKAQVG EMYKQQQASY SAANLNSSFV MRDLEWALDG SGGLQWNRAQ IMQGTGAGGS GSTASITINQ SFTNDADSTG SEYKVGDSNG TATFTVSSNG RMAMNDANQV TVAYLYDNNS AFGVSGGQNV GSGLYGVAFN YIEPQMATTP GSGSYLSTVV PRIEPEGNIN VDLVTLGSGT IAGIGDGGAA GGMDYASPFS GTFTTSSYGA FYISSGGEQV TSCFVVSSTR VVCIDDTTRN PSVSVSVK
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