| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0682 |
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| Symbol | |
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| ID | 4068772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 839766 |
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| End bp | 841655 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982688 |
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| Product | tryptophan 2,3-dioxygenase |
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| Protein accession | YP_589761 |
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| Protein GI | 94967713 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold
[COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.431731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACGA TCGACATTCA CAATCATTTC TTTCCGGAGA GCTGGCCGGA CCTTGCCGCG
AAATTCGGCA CGCCGGACTG GCCGTGGATC AAGCATACGG AACCGGGCAA GGCGACGATC
ATGCTCGGCG ACCGTGAGTT TCGGAAAATC TACTCGGCAT GTTGGGACAT GGACGTCCGC
TTGGCGGAGA TGGATCGCGA TGGCGTAGAC CTGCAGATCA TCTCGGCGAC GCCGGTGCTG
TTTGCGTACG ACCGTCCGGC GGACCAGGCT CTGGAGTGCG CGAAGATTTT CAACGACGCT
GCGTTGGAGT TGTGTGCACG CGCGCCGGGA CGACTGAAGG CACTTTGCCA GGTGCCGCTA
CAAGACATTG ATCTCGCATG CGCGGAACTC GATCGGGCGA TTAAGGACGG GCACCTTGGC
GTGCAGATTG GCAATCATGT TGGCGAGAAG AACCTCGACG ACGCCGGGAT CGAGACGTTC
CTACATCATT GCGCGAGCGT CGGCGCAGCG GTGTTGGTGC ATCCGTGGGA CATGATGGCG
CGCGATCGCA TGCCGAATTA CATGGCGCCG TGGACGGTCG CGATGCCGGC GGAGACTCAG
CTTGGCATCG TGACGATGAT CTTGAGCGGG GCGTTCGATC GATTGCCGGA GAACCTGCGC
ATCTGCTTCG CGCATGGGGG CGGCAGCTTC GCGTTCCTGC TTGGACGCAT GGAGAACGCG
TGGTCGCATC ATCCGGTGGC ACGCGGAAAG TCGGAACTTC CGCCGCGCAG ATACGTGAAC
CGGTTTTATG TGGATTCCGC GGTGTACGAC GAGGAGGCTC TGTGCTTCCT GATCAGCACG
ATGGGAGAAG ACCAAGTCGT GCTGGGATCC GATTATCCGT TTCCGTTGGG AGAAGAGCGA
ATCGGTAAAT TGATTCGGAC TTGCAAGATC GACGGTTCGG CAAAGAAGAA GCTGCTGAAT
GCAAATGCGG CGAGATTCCT GGGGCTGAAG GTTGAAGCGG AGAGCACCGC ACCGGTTGAA
GCTCGCAGTT CCAGCGGATG TCCGGTGGCG CACGGGAACG GTGCGGGTGA CGAGCATAAG
CTGACATACG GGTCGTATTT GAAGATCCCT GAGTTACTCT CGCTTCAGCA ACTGCAGTCC
GAACCACCTC GGCATGATGA ATTGCTTTTC ATCGTGATTC ATCAGACCTA CGAGTTGTGG
TTCAAGGAAC TGCTGCACGA TCTCGAGGCG GTGGTCCGTT GTTTGCAGGC GGTGGCACGT
GATCCGCGGG CGCGAGATGA AGTTTACGAG GCGGCGCGAT TGTTGCGGCG ATGCACTGAA
GTACTGCGGG TGCTGGTGAG CCAGTTCACG ATCCTCGAAA CGATGCTTCC GACCCATTTT
CTCGCCTTCC GTGACAAATT AGAACCGGCG AGTGGTTTCC AGTCGCAGCA GTTCCGGCAG
ATTGAATTTC TCTGCGGGCT GCGCGACGAG AAGCTGATGC GGGTTCATGA GCCCGAGCCG
AAGGAACACG CGGAATTGGT GAAGCGCCTT CACGAACCAT CGCTGCACGA TGTGCTCTTC
GATGCGCTGC GGGCGCTCGG TAAATTGCCG GCGTATGCCC CGGACGCAAC GGATCGCGAT
CGTTTCGAGG CGCGGGCATT CGCGATTCGC GATGTTTATG AAGACGAGAA GCACTTCCGC
GATTGGATCG ACGTATGCGA GCGGCTGACG GAATTCGACG AACTGGTCGT GAGTTGGCGG
CTGCGGCACA TCCAGATGGT GGAGCGCACC ATTGGTCTGA AGATGGGAAC CGGCGGAAGC
ACGGGCGCAT CCTATTTGCG GCTGACGCTC GACAAGACGT TTTTTCCCGA GCTGTGGGAA
GCGCGAACGA TGCTGCGCAA AGCCGAATAG
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| Protein sequence | MQTIDIHNHF FPESWPDLAA KFGTPDWPWI KHTEPGKATI MLGDREFRKI YSACWDMDVR
LAEMDRDGVD LQIISATPVL FAYDRPADQA LECAKIFNDA ALELCARAPG RLKALCQVPL
QDIDLACAEL DRAIKDGHLG VQIGNHVGEK NLDDAGIETF LHHCASVGAA VLVHPWDMMA
RDRMPNYMAP WTVAMPAETQ LGIVTMILSG AFDRLPENLR ICFAHGGGSF AFLLGRMENA
WSHHPVARGK SELPPRRYVN RFYVDSAVYD EEALCFLIST MGEDQVVLGS DYPFPLGEER
IGKLIRTCKI DGSAKKKLLN ANAARFLGLK VEAESTAPVE ARSSSGCPVA HGNGAGDEHK
LTYGSYLKIP ELLSLQQLQS EPPRHDELLF IVIHQTYELW FKELLHDLEA VVRCLQAVAR
DPRARDEVYE AARLLRRCTE VLRVLVSQFT ILETMLPTHF LAFRDKLEPA SGFQSQQFRQ
IEFLCGLRDE KLMRVHEPEP KEHAELVKRL HEPSLHDVLF DALRALGKLP AYAPDATDRD
RFEARAFAIR DVYEDEKHFR DWIDVCERLT EFDELVVSWR LRHIQMVERT IGLKMGTGGS
TGASYLRLTL DKTFFPELWE ARTMLRKAE
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