Gene Acid345_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0155 
Symbol 
ID4069740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp163664 
End bp163915 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content60% 
IMG OID637982155 
ProductXRE family transcriptional regulator 
Protein accessionYP_589234 
Protein GI94967186 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID[TIGR03070] transcriptional regulator, y4mF family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.540606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00139635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGAAA TCGCTCGTAC CTCCAAACAA CTCGGTGCCC TCCTCCGGAA GACCCGCAAG 
AGCCTCGGTC TCACCCAAGC CGACCTGGCG TCTCGAATCG ACGTTCGGCA AGCGACCATT
TCCGATTTAG AGCATGGAGA ACGCGAGGCA AGGCTCGGCA CGGTGCTCCA AGTGCTCGCA
GCGTTGGATC TGGAACTGGT AGTCCGCACT CGCACGCGCG GCGATGCCAA GCATCTAGAG
GACCTCTTCT GA
 
Protein sequence
MDEIARTSKQ LGALLRKTRK SLGLTQADLA SRIDVRQATI SDLEHGEREA RLGTVLQVLA 
ALDLELVVRT RTRGDAKHLE DLF