Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0155 |
Symbol | |
ID | 4069740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 163664 |
End bp | 163915 |
Gene Length | 252 bp |
Protein Length | 83 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637982155 |
Product | XRE family transcriptional regulator |
Protein accession | YP_589234 |
Protein GI | 94967186 |
COG category | [K] Transcription |
COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
TIGRFAM ID | [TIGR03070] transcriptional regulator, y4mF family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.540606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00139635 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGAAA TCGCTCGTAC CTCCAAACAA CTCGGTGCCC TCCTCCGGAA GACCCGCAAG AGCCTCGGTC TCACCCAAGC CGACCTGGCG TCTCGAATCG ACGTTCGGCA AGCGACCATT TCCGATTTAG AGCATGGAGA ACGCGAGGCA AGGCTCGGCA CGGTGCTCCA AGTGCTCGCA GCGTTGGATC TGGAACTGGT AGTCCGCACT CGCACGCGCG GCGATGCCAA GCATCTAGAG GACCTCTTCT GA
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Protein sequence | MDEIARTSKQ LGALLRKTRK SLGLTQADLA SRIDVRQATI SDLEHGEREA RLGTVLQVLA ALDLELVVRT RTRGDAKHLE DLF
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