Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_2034 |
Symbol | |
ID | 4486198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 2307499 |
End bp | 2309061 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639730830 |
Product | integral membrane protein-like |
Protein accession | YP_873792 |
Protein GI | 117929241 |
COG category | [S] Function unknown |
COG ID | [COG5542] Predicted integral membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.247386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCATCG AGTACGTCGG CAGGCTAGGG GTCCAGCCAA AGCGTTCGGG CGCGCCGCCT TCGTGCGTGT CGGCCTGGGC GAAGGCGACG GCGCGGCACT CCGCGGCGCA TGCTCTGGAC CGTGGCGCTC GGCAGCTGGA CGGCACGGCA CTCCGCCGCG GACGGCGCCG GTTCGCGGTC CGGCGCGTTG ACGCGATGGC ACGGCGGTGC GCGCGGCGCG GGTCCAAGGC ACGGACGGCG TCCGTCTGCC GGCCGCCGAT CCGGGGCTGG CGTCGATTCC CGCGTTCCGT CGGTAGGCTT GGCCCGCTGA CAGTTGCGAC GGAGCGGGAC CTCACCATGG CTCACGGATT GATGCGCCGG TACTCGCTCG GCGCGGCGCG CCGGGAACGC GTGCCCGGGG TGTGGCGGGA TGCCGTCTCC TACGTCGTCC GGGTCTTTAT CGCTGTCCGC GTCGGCCTCT TTCTACTCGC GATTCCCGCG GCGGCCGTCA TTCCTCCCAA CCAGCCCGCG GACGTGCCCG ATTGGGCTAC GCCTCCCGTG ACACACGGCC TGGGAATTAT GTTCACCGCA TGGGAGCGGT GGGATGCGTT GTGGTATCTG CGCATTGCCG CGCACGGATA TGCCGTTGAG GACCATAGTG CCGCATTCTT TCCCGGGTAT CCGGCGGCGA TCCGGGCCGT CGCATTTCTG ACCGGAGGGC ACATTCTCCT GGCGGCGTAC GTGGTGTCGA ATCTCGCATA TCTCGCAGCG CTGGCAGTCA TTTACCGTTG GACGCAGGAT GAATTCGATG TCGATCTGGC GAAGCGCACC GTCGTACTCC TCGCGATATT TCCGTCGGCC TTCTTCTTTT TCGCGCCGTA CTCGGAATCG CTGTTCCTCT TGGCGGTTGC GGTAGCGCTG TACGCAGCAC GCCGGTCACG ATGGCTTGTC GCGAGTGTGG CAGCCGGTTT CGGTACCGCC GTCCGGAGCA TGGGCGTTGT CCTGGCGCTT GCCGTGGTGT TCGAATGCCT GAGGCAGTGC GTTTCCGCGC GACCGGCCGG GAGGGACGCC ATCCGCGGCA TCATGCGGTG TCTCGGTGTG GCCGCCGTGT CGGTGTCCGG CGTCATCGCA TATCTCGCGT GGTGGTGGCA GCGAGCAGGA CAGCCTCTAT TGCCGTTTCG ATCCGAAGGC GGCTGGGACC GGAATGCGCA ATGGCCGTGG ATCACGCTAT GGGACGGTGT ACGCGACGGT ATACAGTGGG TCGGCATCTA TCCGGGCGGC TATCACTTCC TCGACCTTCT TGTCGTCGCC GTGGCAGTCG CCTCCGCGGT ATGGGTGATA CGCCGGACCG CGCTGACGTA TGGGATATAT ACGGGCGCTA GTCTCATCGC ACCGCTGTGT ATGGAGTTTC CGGGTCGCCC TTTCATGTCC ATGATGCGGT TCGTCCTCGT CATCGCGCCA ATCTTCTGGG GCATCGCGGA ATTTTCCCGC CGTATCCGGT CATGGACGCC GATTGTCGCA GTCTCCGCAA CTGGTCTTGG AATGTTCTCC TTGCTCTTCA TCAACTGGTA CTGGATTTAC TGA
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Protein sequence | MLIEYVGRLG VQPKRSGAPP SCVSAWAKAT ARHSAAHALD RGARQLDGTA LRRGRRRFAV RRVDAMARRC ARRGSKARTA SVCRPPIRGW RRFPRSVGRL GPLTVATERD LTMAHGLMRR YSLGAARRER VPGVWRDAVS YVVRVFIAVR VGLFLLAIPA AAVIPPNQPA DVPDWATPPV THGLGIMFTA WERWDALWYL RIAAHGYAVE DHSAAFFPGY PAAIRAVAFL TGGHILLAAY VVSNLAYLAA LAVIYRWTQD EFDVDLAKRT VVLLAIFPSA FFFFAPYSES LFLLAVAVAL YAARRSRWLV ASVAAGFGTA VRSMGVVLAL AVVFECLRQC VSARPAGRDA IRGIMRCLGV AAVSVSGVIA YLAWWWQRAG QPLLPFRSEG GWDRNAQWPW ITLWDGVRDG IQWVGIYPGG YHFLDLLVVA VAVASAVWVI RRTALTYGIY TGASLIAPLC MEFPGRPFMS MMRFVLVIAP IFWGIAEFSR RIRSWTPIVA VSATGLGMFS LLFINWYWIY
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