Gene Acel_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1897 
Symbol 
ID4486154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2145123 
End bp2145824 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID639730687 
Productsmall-conductance mechanosensitive channel-like 
Protein accessionYP_873655 
Protein GI117929104 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC TGCGACGATC GCGTGCCGTA CAGGTGACCG CGGCCCTTGC CGCCGAAGCA 
AAGGACATTG TGGTCCGGCC ACATTTTCGC CGCGCGATCG CGGCGGCATT GCTCTTTGTC
GGAGCGTCGG TGGTCTCCGT AAGTCTTGGC GGCATCCACG CCCGGCACCT CGTCGACGGA
CGATCCGAAC CGTGGTTGTC ACACCGCGTC GGCAGCTGGG CAGCCGCCGG TGTCGCGGTC
GTCACCGGTG TGCTCTGCAT CCGGCTCATC GCCAATGAGC TCAGCCGGGT CCTCCGCCAG
CGAGGGAACC CGGCTGCCGC AGGCTCTCTG CATTTGTTGA TCCAGGTTGT CGGCTATCTC
GCCGTCCTGC TGGTGATAGC CGGCCTCCTT GCCGTACGCG TCGAAAGCCT TCTCCTCTCC
GGCGCGATCG GCAGCGTCGT CATTGGCCTG GCCGCCCAGC AGGCGCTCGG CAACGCCATC
GCCGGGATTG TCCTCCTCTT CGCCCGTCCG TTCGTGGTCG GCGACTACAT CACGCTCCGC
GCGGGAGCGC TGGGCGGTCA GTACGACGGC GAGGTGGTGT CGATCACTCT GATGTTCACC
ATCTTGCAGA CCGCAGAGGG ACCAATCTCC CTGCCCAACT CTGCGGTACT CGCTGCCGCC
ACCGGCCGGC GTCAACCTCC GTCCGCCCTG CCGCCTGGTT GA
 
Protein sequence
MPRLRRSRAV QVTAALAAEA KDIVVRPHFR RAIAAALLFV GASVVSVSLG GIHARHLVDG 
RSEPWLSHRV GSWAAAGVAV VTGVLCIRLI ANELSRVLRQ RGNPAAAGSL HLLIQVVGYL
AVLLVIAGLL AVRVESLLLS GAIGSVVIGL AAQQALGNAI AGIVLLFARP FVVGDYITLR
AGALGGQYDG EVVSITLMFT ILQTAEGPIS LPNSAVLAAA TGRRQPPSAL PPG