| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1775 |
|---|
| Symbol | |
|---|
| ID | 4486591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 2011690 |
|---|
| End bp | 2015184 |
|---|
| Gene Length | 3495 bp |
|---|
| Protein Length | 1164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639730565 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_873533 |
|---|
| Protein GI | 117928982 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG2887] RecB family exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.579512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTG CGACGTCCGC CGGATCGGGA GCCGGCGCCC GCCCACGTTT CCGTGCGGCG
GACCTCGCCG GTCTCCTCGG ACTGCCGCCG CCGACCGACG AACAGGCGGC AGTGATCGAA
TCTGCGGCGC CGCTCTCGGT CGTGCTCGCC GGTGCCGGGT CCGGGAAAAC CGAGACGATG
GCCGGTCGGG TGGTCTACTT GGTCGCCAAC GGGATAGTCC GGCCCGAGCA GGTGCTCGGC
CTCACCTTCA CCCGGCGTGC GGCGACCGAG CTGGCCGGGC GAATCCGCCG GCGGTTGACG
CAACTCGCCC GCCGTCGGGT GATCGATCCG GAGGTGCTCG CGGTTGGGGA GCCGACGGTC
GTTACCTACG ACGCGTACGC CGGGCGGATC GTCGCCGATC ACGCCCTGCG GCTGGGCGTA
GAGCCCGGTC TTCGGCTGAT CGGACAGGCT GCGTCGTGGC AGTTCGCCCG CCGGGCGGTT
GACGCCTATG ACGGCCCGAT GGACGCGGTC ACGCTCTCGC CGACAACGGT GACCAATCGG
GTCTTCATCC TCGCCGGCGA GCTGGCGCAG CACCGCGTCG ACGTCGAGTC AGTCGCGGAA
TTCTGTGACC AGTTGGCCGC GAAGCTCTGC GCCCTGCCGT ATCCGCGGGG CAGGAGCCGC
ACGATGGCTG AGGACGTTGA GCGGATTGTC GATCAGCTGA AGCTTCGCCG CCAGCTCCTG
CCCATCGTCG TCGATTACCG GGCGCGCAAA CGGGACGCCG AGGTGCTGGA TTTCGCCGAC
CAGATGGCGC TGGCGGCCAC TTTGGCCGAG CTGTTCCCCG AGGTTGGGGC CGCCGAACGG
GCCGCCTTCC GCGCCGTCCT GCTCGACGAG TTCCAGGACA CCAGCCACGC CCAGCTGGAC
TTCCTCCGGG CGCTGTTCCT GCCGAAGACC GCCCCGCCGG ATGCCGAATC GCCAGCGGCG
GCGCAGCCGT GGCTGACCGT CGTCGGGGAT CCCGCGCAGG CGATTTACGG GTGGCGTGGC
GCGAGCCACG GCACCTTCCG CGCGCTGATC GCCGAGGCGC CCTGTGCCGT CACGGTCTTT
CCGCTGGCGA CGAGCTTTCG GAACAGTCCC GAGATCCTCG CGGTTGCGAA CCTGATCGCC
GAGCCGCTGC GCGCTGGGCG CGACACCACC GCGGTTCCTG TGCTCCGGCC ACGCGACGAC
GCTCCCGTCG GCGAGGCGCG GTGCGCGTGC TACCCGACGG TCGAGGACGA GGCCGCGGCC
GTCGCCGAGT ACGTCGCCAG GGTGCTTCGG GAGGACGAAG CCGCCCGGCA GGCCGGGGAG
CCGGGCCGGA GCATCGCGAT CCTGCTGCGC AAGTGGCGGC AGCTGCTGCC GCTCGAACCG
GCGCTGCGTG CCCGGGGGGT GCCGATCCGC ATCCTCGGTG TCGGCGGGCT GCTCGACCAA
CCGGAGATCG AAGACGTGGT CGCCACCCTG CAGGTGCTCG TCGATCCCGA CCGGGGTGAT
GCGCTGATGC GTCTGCTGAC CGGCGCCCGG TGGCGGATCG GCGCCGCCGA CCTGGCGGCC
TTGCATCGGT GGGCGAGACG CTGTGCGGCC GCCGACGACC GTGCCGCCAC GGAGTCGCAG
ACGTTGCACG GTCCCGACGA CCGTGCCGCC ACGGAGTCGC AGACGTCGCA CGGTCCCGAC
GACGCAGGAG CGCCACTCGG CGGTGACGCA GCGGATTCGC TCAGCCTGGT GGACGCTCTC
GATCGGTTGC GTACCGAGCG ATGGGTCACG CAGTCCGGCT GGTTCTCGGT CGAAGGCGGA
CGTCGGCTCG CCCGGCTCGC CGACGAGCTG CACCACCTCC GGTCGCGATT GTCGCAGCCG
CTGCCGGACC TGGTCGCCGA AGTGATTGCC ACGATCGGCG TCGATGTCGA GGTGCTGGCG
CGCGGCGAGC AGCCCGGCCG GTCGAATCTG GACGCCTTCC TTGAGGTTGC GGCCGACTAT
GCCGACGCCG CAGAGAATCC CACTCTCGGC GGGTTCCTCG ACTACCTCGA GGCGGCTGGG
TACGCGGAGC GGGGGCTGGA CCGTCCGGAG GACGACGCTG CCGTCGCCTT TGACGCGGCC
GCCGGGGAGC GCCGGCCCGG CGTGGTCGAC GTCCTCACCG TGCATGCCGC CAAGGGGCTC
GAATGGGACG TCGTCTGCGT GCCCGGCATG GTGGACGGTG TCTTCCCAAC CGGGGTGCGG
AACACGACAG GCTGGTTGAC CAGCGCGCAC CTGCTGCCGT GGCCGCTTCG CGGCGACCGC
GATGCGCTGC CGAGCATCGA CATGACGACG GCGGACGACC AGAGCGCGGT CGTCGCTCTC
CTCAAAGATT TCGCCGAGGC GGTCAAGTGC CACGCCCTTG CCGAGGAACG GCGGCTGGCG
TACGTCGCCG TCACCCGGGC GCGGCGGTGG CTCTTCTGCA CGGGTTACCG GTGGGATGAC
ACGACCAGAG CACATGCCGA TAGCGCGTTC CTCACCGGCG ACGTGCTCGG CGCCATGCGC
GTGGAGTGCT GGACACCCGT CCCGGATGAC GGGACGGCGA ATCCCCGGCT CGTCGACGGG
CCGCGTCGAG TGGCCTGGCC GGTCGACCCC CTCGGCTCCC GGCGGCCTCA AGTCGAGCGG
GCGGCGGCTC TCGTGCGGGA CGCTGTTGCG GTCGCCGGAG AGCCGATGTC CGGCCGGGAC
GACGGATCGG CGGAGGCGCT GACCGGCGGC GAGGCGGAAC CGCGCCCGCG CACGCCGATT
CCAGCCACGC AGTGGGAGCA GGTCGATGGG TGGTCGCGGG ATATCGCCGT CCTGCTTGCG
GAACGGAGCC GTGCGACGGA GCAATCGGCC GTGGTGCTTC CCGAGCAGTT GTCAGTCACG
CAACTGGTCG CACTCCGCGA GGATCCGTCT CGGTTCGCAG CGCGGCTGCG CCGGCCGCTC
CCGAACAGAC CGGTTCCCTC CGCCCGGCGC GGAACGGCCT TTCACCGCTG GCTTGAGCAA
CGGTTCGCGG CCCCACGCCT CCTCGACGTC GACGAGCTGC CGGGCGCGGC TGACTCTGAT
GCGGCTCCTG ACGACGAACT GGAGGCGCTG AAAACGGCTT TTCTCGAATC CCACTGGGCG
TCCCGGCATC CCGTCGACGT CGAGGTCCCG TTCCACCTCG TGGTCGATGG CCGGGTCATC
CGTGGCCGGA TGGACGCCGT GTTTGCCGAC CCGGACGGTG GATTCACCAT CGTGGACTGG
AAAACGGGAC GCCGTCCGCG CGGAGAGTAC GCGGAGGCTG CGGCTGTCCA GCTTGGCGCG
TACCGGCTTG CCTGGTCGGA GCTTTCCGGC GTCCCGCTCG AACGGGTCCG CGCCACGTTC
TGCTACCTGC GGGACGGCGG CGATTATGCG CCGGCGGACC TGCTTGACCG GAGGGGCCTG
ATGGAGTTGC TGGCGGCGCG GACGCTGCCG TTGGCCGGCC GTCCCCGCTC CGGTTCACCG
TTCAGCGCAC GATGA
|
|---|
| Protein sequence | MTGATSAGSG AGARPRFRAA DLAGLLGLPP PTDEQAAVIE SAAPLSVVLA GAGSGKTETM
AGRVVYLVAN GIVRPEQVLG LTFTRRAATE LAGRIRRRLT QLARRRVIDP EVLAVGEPTV
VTYDAYAGRI VADHALRLGV EPGLRLIGQA ASWQFARRAV DAYDGPMDAV TLSPTTVTNR
VFILAGELAQ HRVDVESVAE FCDQLAAKLC ALPYPRGRSR TMAEDVERIV DQLKLRRQLL
PIVVDYRARK RDAEVLDFAD QMALAATLAE LFPEVGAAER AAFRAVLLDE FQDTSHAQLD
FLRALFLPKT APPDAESPAA AQPWLTVVGD PAQAIYGWRG ASHGTFRALI AEAPCAVTVF
PLATSFRNSP EILAVANLIA EPLRAGRDTT AVPVLRPRDD APVGEARCAC YPTVEDEAAA
VAEYVARVLR EDEAARQAGE PGRSIAILLR KWRQLLPLEP ALRARGVPIR ILGVGGLLDQ
PEIEDVVATL QVLVDPDRGD ALMRLLTGAR WRIGAADLAA LHRWARRCAA ADDRAATESQ
TLHGPDDRAA TESQTSHGPD DAGAPLGGDA ADSLSLVDAL DRLRTERWVT QSGWFSVEGG
RRLARLADEL HHLRSRLSQP LPDLVAEVIA TIGVDVEVLA RGEQPGRSNL DAFLEVAADY
ADAAENPTLG GFLDYLEAAG YAERGLDRPE DDAAVAFDAA AGERRPGVVD VLTVHAAKGL
EWDVVCVPGM VDGVFPTGVR NTTGWLTSAH LLPWPLRGDR DALPSIDMTT ADDQSAVVAL
LKDFAEAVKC HALAEERRLA YVAVTRARRW LFCTGYRWDD TTRAHADSAF LTGDVLGAMR
VECWTPVPDD GTANPRLVDG PRRVAWPVDP LGSRRPQVER AAALVRDAVA VAGEPMSGRD
DGSAEALTGG EAEPRPRTPI PATQWEQVDG WSRDIAVLLA ERSRATEQSA VVLPEQLSVT
QLVALREDPS RFAARLRRPL PNRPVPSARR GTAFHRWLEQ RFAAPRLLDV DELPGAADSD
AAPDDELEAL KTAFLESHWA SRHPVDVEVP FHLVVDGRVI RGRMDAVFAD PDGGFTIVDW
KTGRRPRGEY AEAAAVQLGA YRLAWSELSG VPLERVRATF CYLRDGGDYA PADLLDRRGL
MELLAARTLP LAGRPRSGSP FSAR
|
|---|
| |