Gene Acel_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1641 
Symbol 
ID4485055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1843660 
End bp1844568 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content57% 
IMG OID639730428 
Productextracellular solute-binding protein 
Protein accessionYP_873399 
Protein GI117928848 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.256735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGT CCATACGGGG GGCGACGGGT CACGTCATCT GCACGGGAAT TCTGGTGAGC 
CTTGCTGTCA CGGCGTGTAG CAGCTCCGGC AGTTCCGCCG GATCAAGTGC ACGCTCTACG
GCGTCCGCGG CCGGTACGAG CGCTGTCGGC ACGGCCGGCG CGCAGCCGCT GAAGGCGGGA
ACGCTGAAGA TCGGAACCTC GGCCGACTTT CCTCCCATGA TGATCCGCGA TCCGTCTGAT
CCCTCCAAGG TTCAGGGCTT CGAAGCGGAT ATGATCAAGG CACTTATGGA TCACGTTCAT
CAGAACTACA CGATCCAGAT CTCGAACTTC AGTGGCTTGA TCCCGGCGAT CCAGTCGGGT
CAGCTTGACA TGGCTGTCTC CGACGTCTAC GTGACGGCTG AGCGGGAGAA GGTGGTTGAC
TTCGTGCCAT ACATGAAGAG CGGCCTATCC GTGCTCGTAG CCCAGAAGAA TCTATCGACG
ACGAAGAGCG AGCTTGACTT ATGCGGGAAG CCCATCGGCG TGGTGACCGG CAGCCCGAGT
GAAGCTGAGG CCGGCAACTC AATGACACAG AAGTGCAAGA GCGCGGGAAA GGCTGGCCTC
GATCTCAAGT CCTTCCAGGC CGTATCCGAC GAGCTTGCTC AGATCGATAA TGGCCGACTG
TTCGGAATCA TCGAAGATTC ACTTTCACTG ATTTATGTGC AAAAGCAAAA GCCCGGGGCA
TATGGGGTGG CCTTTGTTGT ACCGGGGACA GAAATAGAAG TCGGTATTGC AGTTGCCAAG
AACAGCCCGA TGTTGCCCGC ATTGCGGAGC GATGTTGAGT GGTACTTGTC CTCTGCTCAA
TACAAGACGG ATGCCAGTAA GTGGGGAATA CCGGACACGT CACTCCTGAG TCCCTCATCG
TCATCCTGA
 
Protein sequence
MKRSIRGATG HVICTGILVS LAVTACSSSG SSAGSSARST ASAAGTSAVG TAGAQPLKAG 
TLKIGTSADF PPMMIRDPSD PSKVQGFEAD MIKALMDHVH QNYTIQISNF SGLIPAIQSG
QLDMAVSDVY VTAEREKVVD FVPYMKSGLS VLVAQKNLST TKSELDLCGK PIGVVTGSPS
EAEAGNSMTQ KCKSAGKAGL DLKSFQAVSD ELAQIDNGRL FGIIEDSLSL IYVQKQKPGA
YGVAFVVPGT EIEVGIAVAK NSPMLPALRS DVEWYLSSAQ YKTDASKWGI PDTSLLSPSS
SS