Gene Acel_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0558 
Symbol 
ID4484985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp590168 
End bp591250 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content65% 
IMG OID639729325 
ProductABC transporter related 
Protein accessionYP_872317 
Protein GI117927766 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.477415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.90177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG TCGTCTTCGA GAAAGCCACC CGCATCTACC CCGGAACGCA GACCCCCGCT 
GTGTCCTCTC TCGATCTAGA GATCGAGGAC GGCGAATTCA TGGTTTTGGT CGGGCCTTCC
GGGTCAGGGA AGACGACCGC GCTGCGGATG CTCGCCGGCT TGGAGGCTGT CGACGAGGGG
CGGATTTACA TTGGCGATCG CGACGTGACC GACGTCCAGC CGAAGGACCG CGACATCGCG
ATGGTGTTTC AGAATTACGC GCTCTACCCC CACATGACGG TCGCTGAGAA CATCGGGTTC
CACCTGAAGA TCAAGAAGCG GCCGAAGGCA GAGATCAGGC AGCGCGTTCT TGAGGCCGCG
CGTCTCTTGG ACCTCGAACC GTATCTGGAC CGCAAGCCCG CCCGTCTCTC CGGTGGCCAG
AGGCAGCGGG TCGCGATGGG TCGGGCGATC GTCCGGCAAC CCCAGGTCTT CTTGATGGAC
GAGCCGCTCT CCAACCTTGA CGCAAAGCTC CGGGTGGCGA CCCGTACACA GATCGCTTCC
TTGCAGCGCC GGCTGGGCGT CACCACCGTG TACGTGACCC ACGACCAGGT CGAAGCGATG
ACGATGGGTG ACCGCGTCGC GGTGCTCCGC GACGGCCTGC TCCAGCAGTG CGACACACCG
CGGGTGCTCT TCGACCGGCC GGTCAACGTC TTCGTCGCCG GCTTCATCGG CAGTCCGGCG
ATGAACCTCA TCGACGTACC GGTTACCGAA GCCGGTGCGC AGTTCGCCAA CCGCACGGTG
CCGCTCACGC CGACGCAGCG GGCGGCTCTC ACCGGCAACA GCGTCACCCT TGGTGTCCGG
CCGGAAGGCT GGGAGATCGT CTCACCCACC GAAGGAGTGC GGGGCGTGGT CGAGCTCGTT
GAGGAGCTCG GCTCCGACTC CTACGCGTAT GTCACGCCTG AGTACGACCC GAACCGGACG
ATCATCGTCC GGCCTACGGG TGGTACGGCG ACGCCGCACA AGGGCGATCA GATCGGCCTG
ACGCCGCGGC CGCACGCGGT GCACCTCTTC GACACGGCCA CGGGGCTTCG CCTGCCTGAT
TAA
 
Protein sequence
MAKVVFEKAT RIYPGTQTPA VSSLDLEIED GEFMVLVGPS GSGKTTALRM LAGLEAVDEG 
RIYIGDRDVT DVQPKDRDIA MVFQNYALYP HMTVAENIGF HLKIKKRPKA EIRQRVLEAA
RLLDLEPYLD RKPARLSGGQ RQRVAMGRAI VRQPQVFLMD EPLSNLDAKL RVATRTQIAS
LQRRLGVTTV YVTHDQVEAM TMGDRVAVLR DGLLQQCDTP RVLFDRPVNV FVAGFIGSPA
MNLIDVPVTE AGAQFANRTV PLTPTQRAAL TGNSVTLGVR PEGWEIVSPT EGVRGVVELV
EELGSDSYAY VTPEYDPNRT IIVRPTGGTA TPHKGDQIGL TPRPHAVHLF DTATGLRLPD