Gene Aboo_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0417 
Symbol 
ID8827360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp414725 
End bp415501 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content38% 
IMG OID 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_003482790 
Protein GI289596094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA CAGAAGGGTT AGTGGACACA GCATACAGGG CTTACGAGAA AAAACTTCTA 
AAGTTAGTTA AAGAAGGAAA AATTCCAAAG CATGTTGGTA TAATAATGGA TGGTAACAGG
AGATTTGCCA GAGAGTTGGA TATGAAACCC ACTCAGGGAC ATCGTGAAGG TAAGGACAAG
TTGGAAGAAG TTATTGAATG GTGCAGGGAG ATAGGAATAA AAATCCTAAC AGTTTATGCT
TTTTCTACGG AGAATTTTAA GAGGAGTAGA GAGGAAGTTC TGGAGCTTAT GAGATTGTTT
ATTGAGAATT TAAAAAAAGC AGCCGATGAT GAAAGAGTCC ATAAAAACAA GATAAGAATA
AAAGTTATAG GGCAAAGGGA GGTGCTTCCA GAAGAATTAA GGGAAGCGAT AGAGTATGCT
GAAGAGAGGA CGAAAAATTA TGATGAATTC TTTTTTAATA TAGCCATAGC TTATGGAGGA
AGAGAAGAGA TAATAAAGGC CATAAAGGAG ATCGCTCAAG AGGTCAAAGA TGGAAAATTG
GAGGTAGAGG ATATAACAGA AGAAACTGTT AGAAAGCACC TCTATACAGG AGATTTACCA
GATCCAGATC TAATTCTTCG TACCTCCGGT GAGGAGAGAA TAAGCAATTT TCTCCTTTGG
CAGAGTGCCT ATAGTGAGTT CTATTTTGCA GATATATACT GGCCAACATT TCGCAAGATA
GATTTTCTTC GTGCAATTCG CTCCTATCAA ATGAGACAGA GAAGGTTTGG GAGGTAA
 
Protein sequence
MDFTEGLVDT AYRAYEKKLL KLVKEGKIPK HVGIIMDGNR RFARELDMKP TQGHREGKDK 
LEEVIEWCRE IGIKILTVYA FSTENFKRSR EEVLELMRLF IENLKKAADD ERVHKNKIRI
KVIGQREVLP EELREAIEYA EERTKNYDEF FFNIAIAYGG REEIIKAIKE IAQEVKDGKL
EVEDITEETV RKHLYTGDLP DPDLILRTSG EERISNFLLW QSAYSEFYFA DIYWPTFRKI
DFLRAIRSYQ MRQRRFGR